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The map label for this gene is fapR [H]

Identifier: 49186704

GI number: 49186704

Start: 3669654

End: 3670406

Strand: Reverse

Name: fapR [H]

Synonym: BAS3705

Alternate gene names: 49186704

Gene position: 3670406-3669654 (Counterclockwise)

Preceding gene: 49186705

Following gene: 49186703

Centisome position: 70.2

GC content: 36.79

Gene sequence:

>753_bases
ATGATCAATATGCGTCGTTGCGTACGTATCTTGACGGGACAGGTGTGTTCCAGGGAGAGAAGCTCGATTAAAGGGAGGCG
ACAAAAGTTTTTGTTGCATTCTACTTTTAATGATTATATACTACTGTTAGTACCTAGTCATAAAAATGGATGGTGCGGTA
TGAAAAAAAGAAGAAGTAAAAAAGAAAGACAAGAATTATTACAACAAACTATAGAAACGAATCCTTTTATTACGGATGAA
GATTTAGCAGAGAAATTTCAAGTGAGTATACAAACTGTACGTCTCGATCGTATGGAATTATCTATTCCTGAACTAAGAGA
AAGAATTAAACATGTAGCTACAAAGCAACATGAAGAAGATGTGAAATCTTTACCGTTAGAAGAGGTTGTCGGAGAAATTA
TTGATATAGAATTAGATAGACATGCGATTTCTATCTTTGAAGTGAAGGTAGAACACGTATTTAAAAGAAATCAAATTGCC
CGTGGGCATCATTTGTTTGCACAAGCAAACTCACTAGCTGTTGCGGTTATTGATGAAGAATTAGCTTTAACTGCAAAGTC
TACCATTCGATACATTCGTCCTGTAAAATTAGGAGAGCGTGTTGTTGCAAAAGCGCGCGTGGAAGATGTAGAGAATGACA
AAGGGCGGACGGTTGTCAAAGTGCGTAGCTTCGTTGGAGAAGAACTTGTTTTTACAGGCACTTTTGAAATGTATCGATCT
AGTAATTATAGTGAGGAAGGTAACAACTTATGA

Upstream 100 bases:

>100_bases
CCAGAATTCAAGGTTGCTGATATGGTACATGATTATCGGGCGTTAGAAACAGCTAGACAAGATGCGGCGTTACTAGTAGA
TTCAGAAGCATTTTGGCATA

Downstream 100 bases:

>100_bases
AAATCGCAATAGATGCAATGGGCGGCGATCATGCTCCAAAGGCTGTCGTACTAGGAGCAATGAAAGCTATTAAGGAATAT
TCTGATTTACATATTACGTT

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MINMRRCVRILTGQVCSRERSSIKGRRQKFLLHSTFNDYILLLVPSHKNGWCGMKKRRSKKERQELLQQTIETNPFITDE
DLAEKFQVSIQTVRLDRMELSIPELRERIKHVATKQHEEDVKSLPLEEVVGEIIDIELDRHAISIFEVKVEHVFKRNQIA
RGHHLFAQANSLAVAVIDEELALTAKSTIRYIRPVKLGERVVAKARVEDVENDKGRTVVKVRSFVGEELVFTGTFEMYRS
SNYSEEGNNL

Sequences:

>Translated_250_residues
MINMRRCVRILTGQVCSRERSSIKGRRQKFLLHSTFNDYILLLVPSHKNGWCGMKKRRSKKERQELLQQTIETNPFITDE
DLAEKFQVSIQTVRLDRMELSIPELRERIKHVATKQHEEDVKSLPLEEVVGEIIDIELDRHAISIFEVKVEHVFKRNQIA
RGHHLFAQANSLAVAVIDEELALTAKSTIRYIRPVKLGERVVAKARVEDVENDKGRTVVKVRSFVGEELVFTGTFEMYRS
SNYSEEGNNL
>Mature_250_residues
MINMRRCVRILTGQVCSRERSSIKGRRQKFLLHSTFNDYILLLVPSHKNGWCGMKKRRSKKERQELLQQTIETNPFITDE
DLAEKFQVSIQTVRLDRMELSIPELRERIKHVATKQHEEDVKSLPLEEVVGEIIDIELDRHAISIFEVKVEHVFKRNQIA
RGHHLFAQANSLAVAVIDEELALTAKSTIRYIRPVKLGERVVAKARVEDVENDKGRTVVKVRSFVGEELVFTGTFEMYRS
SNYSEEGNNL

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683
- InterPro:   IPR017275
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 28985; Mature: 28985

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINMRRCVRILTGQVCSRERSSIKGRRQKFLLHSTFNDYILLLVPSHKNGWCGMKKRRSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH
KERQELLQQTIETNPFITDEDLAEKFQVSIQTVRLDRMELSIPELRERIKHVATKQHEED
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHH
VKSLPLEEVVGEIIDIELDRHAISIFEVKVEHVFKRNQIARGHHLFAQANSLAVAVIDEE
HHCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEEEECHH
LALTAKSTIRYIRPVKLGERVVAKARVEDVENDKGRTVVKVRSFVGEELVFTGTFEMYRS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECHHHHHHC
SNYSEEGNNL
CCCCCCCCCC
>Mature Secondary Structure
MINMRRCVRILTGQVCSRERSSIKGRRQKFLLHSTFNDYILLLVPSHKNGWCGMKKRRSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH
KERQELLQQTIETNPFITDEDLAEKFQVSIQTVRLDRMELSIPELRERIKHVATKQHEED
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHH
VKSLPLEEVVGEIIDIELDRHAISIFEVKVEHVFKRNQIARGHHLFAQANSLAVAVIDEE
HHCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEEEECHH
LALTAKSTIRYIRPVKLGERVVAKARVEDVENDKGRTVVKVRSFVGEELVFTGTFEMYRS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECHHHHHHC
SNYSEEGNNL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA