Click here to switch to the map view.

The map label for this gene is korA [H]

Identifier: 49186624

GI number: 49186624

Start: 3584586

End: 3586343

Strand: Reverse

Name: korA [H]

Synonym: BAS3623

Alternate gene names: 49186624

Gene position: 3586343-3584586 (Counterclockwise)

Preceding gene: 49186625

Following gene: 49186623

Centisome position: 68.59

GC content: 38.34

Gene sequence:

>1758_bases
ATGATTAGTCAACTTTCATGGAAAGTTGGAGGCCAACAAGGTGAAGGAATTGAAAGTACAGGAGAAATCTTCTGTATTGC
ATTAAACCGATTAGGATATTACCTATACGGTTACCGCCACTTCTCATCACGTATTAAAGGCGGCCATACAAATAATAAAA
TTCGTGTAAGTACAACAGAAGTACGCGCGATCTCAGATGATTTAGATATTTTAATTGCTTTTGATCAAGAAACAATTGAT
TTTAACTTCCACGAACTACGTCCGGGCGGGATTGTAGTTGCAGATGCGAAATTTAATCCGACAATACCTGACAATACAGA
TGTAAATCTATATGTGATACCGTTTACAGATATTGCTTCAGAATTAGGCACATCGTTAATGAAAAACATGGTTGCTGTTG
GAGCATCAAGTGCGGTATTAGGATTAGATGAAACAGCTTATTTAGATGTTGTTGAAGAGATCTTTGGTCGTAAAGGAGAG
CAAGTTGTTCAAAAGAATATGGACGCAATTAAGCGCGGCTCTCAATATATGAAAGAGTTACTAGGTGAGAAAGTAAACAT
GATGCAGCTTGAAAAAGCTGATGGTCAGAAGCGCATGTTTATGATTGGGAACGATGCGATCGCATTTGGTGCAGTAGCTG
GTGGTGCTCGCTTTATGTCTGCATATCCAATTACACCTGCATCTGAAATTATGGAATACTTAATTAAAAAATTGCCAAAA
GTCGGCGGAACAGTAATCCAAACTGAGGATGAAATTGCAGCTTGTACAATGGCAATCGGTGCAAACTATGCTGGTGTTCG
TACATTAACTGCATCTGCTGGTCCAGGTCTATCTTTAATGATGGAAGCGATTGGTTTAGCAGGTATTACAGAAACGCCAT
TAGTAATTGTTGATACACAACGTGGTGGTCCAAGTACAGGATTACCAACGAAACAAGAGCAGTCTGATTTAATGGCAATG
ATTTACGGTACGCACGGTGAAATTCCAAAAATCGTAATGGCGCCAAGTACAGTTGAAGAAGCATTCTATGATATTGTAGA
AGCGTTTAACTTATCTGAAGAATATCAAGTACCTGTTATTTTCTTAACAGATTTACAGCTTTCTTTAGGGAAACAGACAG
TAGAACCACTTAAGTTAGATAAAGTGGAAATTCGTCGTGGTAAGCTTGATTTAGAAGCGGAATTACCAGAACGTGAAAAT
AAAGCATACTTCAAGCGTTATGAAGTAACAGAAGATGGCGTTTCACCACGTGTTTTACCTGGTATGAAAAATGGTGTTCA
CCATGTTACAGGTGTAGAACATGATGAAACTGGTAAACCATCTGAATCAGCATTAAACCGTAAAGATCAAATGGACAAAC
GTTTCCGTAAAATGGAGAACTTGAAGTTTAATACCCCTGTTTATAAAAATGTTAAGCATGAAGAAGCAGACGTATTGCTT
GTTGGATTTAACTCAACTCGTGGTGCGATCGAAGAAGCGATGGAGCGCTTAGAACAAGAGGGTATGAAAGTAAACCATGC
TCATGTGCGTTTAATTCACCCGTTCCCAACAGCTGAAATCGATCCACTTGTGAAAAAAGCGAAGCGTGTTGTAGTGGTAG
AAAACAATGCAACAGGTCAACTTGCTAACATTATGAAAATGAATCTTGGAAACGGTGAGAAAATTTCTAGTCTTTTAAAA
TATGATGGAAACCCATTCTTGCCGAAAGAGATTTACAACGAATGCAAAAAAGGGGTTGTATTAAATGGCAACATTTAA

Upstream 100 bases:

>100_bases
GCATAATTTGCGTCCATTGTAGTTTATTTGCATAAAAAATGCTAAACTATTACTGTAAAAAAATACACTACAATGAATGC
AGCCAAAAGGGGTGTAGGAG

Downstream 100 bases:

>100_bases
GGACTTTCGTAACAGTGTAAAACCAAACTGGTGCCCAGGTTGCGGAGACTTCTCGGTGCAAGCTGCAATTCAACGTGCGG
CAGCTAACGTTGGCTTAAAT

Product: pyruvate ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MISQLSWKVGGQQGEGIESTGEIFCIALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTEVRAISDDLDILIAFDQETID
FNFHELRPGGIVVADAKFNPTIPDNTDVNLYVIPFTDIASELGTSLMKNMVAVGASSAVLGLDETAYLDVVEEIFGRKGE
QVVQKNMDAIKRGSQYMKELLGEKVNMMQLEKADGQKRMFMIGNDAIAFGAVAGGARFMSAYPITPASEIMEYLIKKLPK
VGGTVIQTEDEIAACTMAIGANYAGVRTLTASAGPGLSLMMEAIGLAGITETPLVIVDTQRGGPSTGLPTKQEQSDLMAM
IYGTHGEIPKIVMAPSTVEEAFYDIVEAFNLSEEYQVPVIFLTDLQLSLGKQTVEPLKLDKVEIRRGKLDLEAELPEREN
KAYFKRYEVTEDGVSPRVLPGMKNGVHHVTGVEHDETGKPSESALNRKDQMDKRFRKMENLKFNTPVYKNVKHEEADVLL
VGFNSTRGAIEEAMERLEQEGMKVNHAHVRLIHPFPTAEIDPLVKKAKRVVVVENNATGQLANIMKMNLGNGEKISSLLK
YDGNPFLPKEIYNECKKGVVLNGNI

Sequences:

>Translated_585_residues
MISQLSWKVGGQQGEGIESTGEIFCIALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTEVRAISDDLDILIAFDQETID
FNFHELRPGGIVVADAKFNPTIPDNTDVNLYVIPFTDIASELGTSLMKNMVAVGASSAVLGLDETAYLDVVEEIFGRKGE
QVVQKNMDAIKRGSQYMKELLGEKVNMMQLEKADGQKRMFMIGNDAIAFGAVAGGARFMSAYPITPASEIMEYLIKKLPK
VGGTVIQTEDEIAACTMAIGANYAGVRTLTASAGPGLSLMMEAIGLAGITETPLVIVDTQRGGPSTGLPTKQEQSDLMAM
IYGTHGEIPKIVMAPSTVEEAFYDIVEAFNLSEEYQVPVIFLTDLQLSLGKQTVEPLKLDKVEIRRGKLDLEAELPEREN
KAYFKRYEVTEDGVSPRVLPGMKNGVHHVTGVEHDETGKPSESALNRKDQMDKRFRKMENLKFNTPVYKNVKHEEADVLL
VGFNSTRGAIEEAMERLEQEGMKVNHAHVRLIHPFPTAEIDPLVKKAKRVVVVENNATGQLANIMKMNLGNGEKISSLLK
YDGNPFLPKEIYNECKKGVVLNGNI
>Mature_585_residues
MISQLSWKVGGQQGEGIESTGEIFCIALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTEVRAISDDLDILIAFDQETID
FNFHELRPGGIVVADAKFNPTIPDNTDVNLYVIPFTDIASELGTSLMKNMVAVGASSAVLGLDETAYLDVVEEIFGRKGE
QVVQKNMDAIKRGSQYMKELLGEKVNMMQLEKADGQKRMFMIGNDAIAFGAVAGGARFMSAYPITPASEIMEYLIKKLPK
VGGTVIQTEDEIAACTMAIGANYAGVRTLTASAGPGLSLMMEAIGLAGITETPLVIVDTQRGGPSTGLPTKQEQSDLMAM
IYGTHGEIPKIVMAPSTVEEAFYDIVEAFNLSEEYQVPVIFLTDLQLSLGKQTVEPLKLDKVEIRRGKLDLEAELPEREN
KAYFKRYEVTEDGVSPRVLPGMKNGVHHVTGVEHDETGKPSESALNRKDQMDKRFRKMENLKFNTPVYKNVKHEEADVLL
VGFNSTRGAIEEAMERLEQEGMKVNHAHVRLIHPFPTAEIDPLVKKAKRVVVVENNATGQLANIMKMNLGNGEKISSLLK
YDGNPFLPKEIYNECKKGVVLNGNI

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005476 [H]

Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 64489; Mature: 64489

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQLSWKVGGQQGEGIESTGEIFCIALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTE
CCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCEEHHHHHHHHHHHCCCCCCCEEEEEEHH
VRAISDDLDILIAFDQETIDFNFHELRPGGIVVADAKFNPTIPDNTDVNLYVIPFTDIAS
EEEECCCCEEEEEECCCEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHH
ELGTSLMKNMVAVGASSAVLGLDETAYLDVVEEIFGRKGEQVVQKNMDAIKRGSQYMKEL
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LGEKVNMMQLEKADGQKRMFMIGNDAIAFGAVAGGARFMSAYPITPASEIMEYLIKKLPK
HCCCCCCEEEECCCCCEEEEEECCCCEEEHHHCCCHHHHEECCCCCHHHHHHHHHHHHHH
VGGTVIQTEDEIAACTMAIGANYAGVRTLTASAGPGLSLMMEAIGLAGITETPLVIVDTQ
CCCEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECC
RGGPSTGLPTKQEQSDLMAMIYGTHGEIPKIVMAPSTVEEAFYDIVEAFNLSEEYQVPVI
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEE
FLTDLQLSLGKQTVEPLKLDKVEIRRGKLDLEAELPERENKAYFKRYEVTEDGVSPRVLP
EEECCCHHHCCHHCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHEEECCCCCCCCCCCC
GMKNGVHHVTGVEHDETGKPSESALNRKDQMDKRFRKMENLKFNTPVYKNVKHEEADVLL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEE
VGFNSTRGAIEEAMERLEQEGMKVNHAHVRLIHPFPTAEIDPLVKKAKRVVVVENNATGQ
EECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCH
LANIMKMNLGNGEKISSLLKYDGNPFLPKEIYNECKKGVVLNGNI
HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCC
>Mature Secondary Structure
MISQLSWKVGGQQGEGIESTGEIFCIALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTE
CCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCEEHHHHHHHHHHHCCCCCCCEEEEEEHH
VRAISDDLDILIAFDQETIDFNFHELRPGGIVVADAKFNPTIPDNTDVNLYVIPFTDIAS
EEEECCCCEEEEEECCCEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEEEHHHHHH
ELGTSLMKNMVAVGASSAVLGLDETAYLDVVEEIFGRKGEQVVQKNMDAIKRGSQYMKEL
HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LGEKVNMMQLEKADGQKRMFMIGNDAIAFGAVAGGARFMSAYPITPASEIMEYLIKKLPK
HCCCCCCEEEECCCCCEEEEEECCCCEEEHHHCCCHHHHEECCCCCHHHHHHHHHHHHHH
VGGTVIQTEDEIAACTMAIGANYAGVRTLTASAGPGLSLMMEAIGLAGITETPLVIVDTQ
CCCEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEECC
RGGPSTGLPTKQEQSDLMAMIYGTHGEIPKIVMAPSTVEEAFYDIVEAFNLSEEYQVPVI
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEE
FLTDLQLSLGKQTVEPLKLDKVEIRRGKLDLEAELPERENKAYFKRYEVTEDGVSPRVLP
EEECCCHHHCCHHCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHEEECCCCCCCCCCCC
GMKNGVHHVTGVEHDETGKPSESALNRKDQMDKRFRKMENLKFNTPVYKNVKHEEADVLL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEE
VGFNSTRGAIEEAMERLEQEGMKVNHAHVRLIHPFPTAEIDPLVKKAKRVVVVENNATGQ
EECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCH
LANIMKMNLGNGEKISSLLKYDGNPFLPKEIYNECKKGVVLNGNI
HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]