Click here to switch to the map view.

The map label for this gene is csoR [H]

Identifier: 49186578

GI number: 49186578

Start: 3534475

End: 3534777

Strand: Reverse

Name: csoR [H]

Synonym: BAS3577

Alternate gene names: 49186578

Gene position: 3534777-3534475 (Counterclockwise)

Preceding gene: 49186579

Following gene: 49186577

Centisome position: 67.6

GC content: 32.34

Gene sequence:

>303_bases
ATGGATCATAAAGAGCATGAAGCAGTAACACATAGATCAGAAAAAGAAAAAGAACAAATTATAAATAGATTAAAGAGAAT
TGAAGGACAAGTCCGCGGTATTCAAAATATGATTGAAAATGATCGTTATTGCGTGGATATTTTAGTGCAAATTTCAGCGA
TTAATGCAGCGATGAAAAAAGTAGGAATGGGTGTATTAAAAAACCATACGAGTCATTGTGTTTCAGGTGCAATTAAAGAT
GGTAATGGTGACGAAGCAATTGAAGAATTAATGACAGTATTTGAACGTTTTTCAAAAGCGTAA

Upstream 100 bases:

>100_bases
TCATATGGGGTATCATGCATAGATATTTAATGCTATAATTGGTATACTCATAAAAACAGTTGTTTTATTGGATGAAGAGA
AACTTTAAGAAGGTGATAAT

Downstream 100 bases:

>100_bases
AAACAAGCTAGTATGTAACTGGCTTGTTTTTTTCTTTATTCTTGTATGGGTGTGAAAAAGTGTGTGTAAAATAAACTTTT
AGAAAAAATTGAAAAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDHKEHEAVTHRSEKEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVSGAIKD
GNGDEAIEELMTVFERFSKA

Sequences:

>Translated_100_residues
MDHKEHEAVTHRSEKEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVSGAIKD
GNGDEAIEELMTVFERFSKA
>Mature_100_residues
MDHKEHEAVTHRSEKEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVSGAIKD
GNGDEAIEELMTVFERFSKA

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11320; Mature: 11320

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHKEHEAVTHRSEKEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGMGVLKNHTSHCVSGAIKDGNGDEAIEELMTVFERFSKA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDHKEHEAVTHRSEKEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGMGVLKNHTSHCVSGAIKDGNGDEAIEELMTVFERFSKA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]