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The map label for this gene is 49186429

Identifier: 49186429

GI number: 49186429

Start: 3396348

End: 3397880

Strand: Reverse

Name: 49186429

Synonym: BAS3425

Alternate gene names: NA

Gene position: 3397880-3396348 (Counterclockwise)

Preceding gene: 49186431

Following gene: 49186426

Centisome position: 64.99

GC content: 34.38

Gene sequence:

>1533_bases
TTGGAAGAAAAGTGGTGTAATTATTTGTTAAATGAAGGAAGGGATTGGAAAACTATGAATAAAACAATTTTAAAAACATG
TATCATATCAGCAGTTCTAGGTGGAGTTCTATTAACTGAAAAAAATGGAGAAGTAAAAGCAGAAGAGATTACACCACAAA
CGAATCATACTGGTGTATTTAAAGATGTTCCAAAGGGGCACTGGGCATATGAGGCGATTCAGCAATTAACAGATGAGAAA
ATCGTTTTCGGATATGATGATGGGAGATTTGGTTTTGGAGATAATGTGACACGCGAACAAGTTGCAGCTTTACTGTATCG
TTATTTTAATTTGGCAGAAGAGAAAAATTATGAGAATCCATATGGGGACGTAAGTGAAGAGTCGACAAGCTATATAAAGG
AAATCTTGTCTTTAACAGAAATGGGCGTTTTTAAGGGTGACGAGCACGGGAACTTTAGACCGAAGGCATCCTTAACACGT
GCAGAAATGGCACAAGTTCTTACAAATGCTTTTCATTTAAAGGCAAAGAGTAATCATACTTTTAATGACGTTTCAACGAA
CTCATGGGCAAGCAATGCCATTAGTGCTGTTCAAACAAATAATATTGCAAAAGGAGTAGGCGGAGGGAATTTTGCTCCAA
ATATGGATGTGACGCGTGAACAGTATGCACAATTTTTATACAATGCAATACAAGAAACTGAGAAAACTCAAGAAACGAAA
GGGCAACTATTAGCTAGCATACTTGGTGAAACAAATTGGCAAGGGACAAAAGTCTATGACAAAGATCATAATGATGTAAC
GAAAGAAAATCAGAATTTCATCGGGCTTGCAAAGTATGATGCTAAAACGGCAAGGTATGAATTTTTTAATGCAAGTACAG
GAGAGAGTCGTAATGATAGCGGTACCTTTTTTATAACTAATGATGGAAAGAAAAGAGTACTAATTTCTGAGACGCAAAAT
TACCAAGCAGTTGTTGAATTAACGCAATTAGATAAAGAGAAATTTACATATAAAAGAATGGGGAAAGATGCAAAAAGGAA
CGATGTAGAAGTATTTGTTGAACATATTCCTTATCAAGAAAAAGAGCTATCTTTCACGCGACCTGATAAAAATTTAGAGA
GCTCGACGGGTAAAATAGTTACGGATGTTGATGGAGATAAAATATTATCTAGTACACTATGGAATGGAACGGTGGTATTA
GATGAACAAGGTAATAATGTAACAAAATACAATTCAAACTTAATCAGTCTAGCAAAATATGATAAAAATACAAATAAATA
TGAGTTTTTTAATGTGAATACAGGAGAAAGTCGTGGAGACTATGGTTTCTTTGATGTTGTACATGATAATAAAATAAGAG
CCCACGTTTCGTTAGGAAATAATAAATACGGTGCAGTTCTTGAACTTACAGAATTAAATAAAGAGAAATTTACGTATACA
AGAATGGGGAAAGATGCGAATGGAAAAGATATAAAAATCTTTGTTGAGCATGAACCGAATACAGGTGACCTAAAACCAAA
TTTCACAAAGTAA

Upstream 100 bases:

>100_bases
AGCTATGGATACTACGAAAAAACTTTGGAGGTGTAACACTTTGTATCCAATTAGCTGTAATGAAAATTTAAAACATGAAT
TGCTCACATAGAGTCTTCTT

Downstream 100 bases:

>100_bases
GCCTTTACTGTATGTAGCAAAGGCATTATGTTAGAAAAGGTTAGTAAGGAAAGATCAGAGTGATTATATAATTAAAATAG
TTGTTTATAGACAAATAGAT

Product: S-layer protein

Products: NA

Alternate protein names: Surface layer protein [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MEEKWCNYLLNEGRDWKTMNKTILKTCIISAVLGGVLLTEKNGEVKAEEITPQTNHTGVFKDVPKGHWAYEAIQQLTDEK
IVFGYDDGRFGFGDNVTREQVAALLYRYFNLAEEKNYENPYGDVSEESTSYIKEILSLTEMGVFKGDEHGNFRPKASLTR
AEMAQVLTNAFHLKAKSNHTFNDVSTNSWASNAISAVQTNNIAKGVGGGNFAPNMDVTREQYAQFLYNAIQETEKTQETK
GQLLASILGETNWQGTKVYDKDHNDVTKENQNFIGLAKYDAKTARYEFFNASTGESRNDSGTFFITNDGKKRVLISETQN
YQAVVELTQLDKEKFTYKRMGKDAKRNDVEVFVEHIPYQEKELSFTRPDKNLESSTGKIVTDVDGDKILSSTLWNGTVVL
DEQGNNVTKYNSNLISLAKYDKNTNKYEFFNVNTGESRGDYGFFDVVHDNKIRAHVSLGNNKYGAVLELTELNKEKFTYT
RMGKDANGKDIKIFVEHEPNTGDLKPNFTK

Sequences:

>Translated_510_residues
MEEKWCNYLLNEGRDWKTMNKTILKTCIISAVLGGVLLTEKNGEVKAEEITPQTNHTGVFKDVPKGHWAYEAIQQLTDEK
IVFGYDDGRFGFGDNVTREQVAALLYRYFNLAEEKNYENPYGDVSEESTSYIKEILSLTEMGVFKGDEHGNFRPKASLTR
AEMAQVLTNAFHLKAKSNHTFNDVSTNSWASNAISAVQTNNIAKGVGGGNFAPNMDVTREQYAQFLYNAIQETEKTQETK
GQLLASILGETNWQGTKVYDKDHNDVTKENQNFIGLAKYDAKTARYEFFNASTGESRNDSGTFFITNDGKKRVLISETQN
YQAVVELTQLDKEKFTYKRMGKDAKRNDVEVFVEHIPYQEKELSFTRPDKNLESSTGKIVTDVDGDKILSSTLWNGTVVL
DEQGNNVTKYNSNLISLAKYDKNTNKYEFFNVNTGESRGDYGFFDVVHDNKIRAHVSLGNNKYGAVLELTELNKEKFTYT
RMGKDANGKDIKIFVEHEPNTGDLKPNFTK
>Mature_510_residues
MEEKWCNYLLNEGRDWKTMNKTILKTCIISAVLGGVLLTEKNGEVKAEEITPQTNHTGVFKDVPKGHWAYEAIQQLTDEK
IVFGYDDGRFGFGDNVTREQVAALLYRYFNLAEEKNYENPYGDVSEESTSYIKEILSLTEMGVFKGDEHGNFRPKASLTR
AEMAQVLTNAFHLKAKSNHTFNDVSTNSWASNAISAVQTNNIAKGVGGGNFAPNMDVTREQYAQFLYNAIQETEKTQETK
GQLLASILGETNWQGTKVYDKDHNDVTKENQNFIGLAKYDAKTARYEFFNASTGESRNDSGTFFITNDGKKRVLISETQN
YQAVVELTQLDKEKFTYKRMGKDAKRNDVEVFVEHIPYQEKELSFTRPDKNLESSTGKIVTDVDGDKILSSTLWNGTVVL
DEQGNNVTKYNSNLISLAKYDKNTNKYEFFNVNTGESRGDYGFFDVVHDNKIRAHVSLGNNKYGAVLELTELNKEKFTYT
RMGKDANGKDIKIFVEHEPNTGDLKPNFTK

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 57766; Mature: 57766

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKWCNYLLNEGRDWKTMNKTILKTCIISAVLGGVLLTEKNGEVKAEEITPQTNHTGVF
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHCCCCCCCCCCC
KDVPKGHWAYEAIQQLTDEKIVFGYDDGRFGFGDNVTREQVAALLYRYFNLAEEKNYENP
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
YGDVSEESTSYIKEILSLTEMGVFKGDEHGNFRPKASLTRAEMAQVLTNAFHLKAKSNHT
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCC
FNDVSTNSWASNAISAVQTNNIAKGVGGGNFAPNMDVTREQYAQFLYNAIQETEKTQETK
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GQLLASILGETNWQGTKVYDKDHNDVTKENQNFIGLAKYDAKTARYEFFNASTGESRNDS
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCC
GTFFITNDGKKRVLISETQNYQAVVELTQLDKEKFTYKRMGKDAKRNDVEVFVEHIPYQE
CEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
KELSFTRPDKNLESSTGKIVTDVDGDKILSSTLWNGTVVLDEQGNNVTKYNSNLISLAKY
CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEECCCCCEEEECCCEEEEEEC
DKNTNKYEFFNVNTGESRGDYGFFDVVHDNKIRAHVSLGNNKYGAVLELTELNKEKFTYT
CCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCHHEEEE
RMGKDANGKDIKIFVEHEPNTGDLKPNFTK
ECCCCCCCCEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEEKWCNYLLNEGRDWKTMNKTILKTCIISAVLGGVLLTEKNGEVKAEEITPQTNHTGVF
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHCCCCCCCCCCC
KDVPKGHWAYEAIQQLTDEKIVFGYDDGRFGFGDNVTREQVAALLYRYFNLAEEKNYENP
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
YGDVSEESTSYIKEILSLTEMGVFKGDEHGNFRPKASLTRAEMAQVLTNAFHLKAKSNHT
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCC
FNDVSTNSWASNAISAVQTNNIAKGVGGGNFAPNMDVTREQYAQFLYNAIQETEKTQETK
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GQLLASILGETNWQGTKVYDKDHNDVTKENQNFIGLAKYDAKTARYEFFNASTGESRNDS
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCC
GTFFITNDGKKRVLISETQNYQAVVELTQLDKEKFTYKRMGKDAKRNDVEVFVEHIPYQE
CEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
KELSFTRPDKNLESSTGKIVTDVDGDKILSSTLWNGTVVLDEQGNNVTKYNSNLISLAKY
CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEECCCCCEEEECCCEEEEEEC
DKNTNKYEFFNVNTGESRGDYGFFDVVHDNKIRAHVSLGNNKYGAVLELTELNKEKFTYT
CCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCEEEEEECCCCHHEEEE
RMGKDANGKDIKIFVEHEPNTGDLKPNFTK
ECCCCCCCCEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8964497 [H]