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The map label for this gene is 49186394

Identifier: 49186394

GI number: 49186394

Start: 3361322

End: 3362047

Strand: Direct

Name: 49186394

Synonym: BAS3389

Alternate gene names: NA

Gene position: 3361322-3362047 (Clockwise)

Preceding gene: 49186380

Following gene: 49186403

Centisome position: 64.29

GC content: 29.2

Gene sequence:

>726_bases
ATGATATTTCAAAATTATTGTACTCCTCCTCTTCCATATTCGCAACAACTTTTTGAAATATTTATATGTCCATATTTCAA
AAATATTGTTTCCACCTATATTTTCCTGTATATTTTTATTGAGGTGATTGTATTGAATGGCTTTGAAAAAGTGAAAGAAA
AGAAAAAACGCGCTATTAAAGAGGCAGCTTTTTTATTATTTTCAGAACGTGGATTTAATGAAGTAAAAATAGAACATATC
GCAAAAGAAGCAAACGTTTCTCAAGTTACAATTTATAATCATTTTGGAAGTAAAGATGCGTTATTTAGAGAACTTATACA
AGAATTTATCATATGTGAATTTCAATATTATAAAGAACTTGCTGAAGAAAAATTACCTTTCCATGACATGATGCAAAAAA
TGATTGTACGAAAAATGAATACTGGCGGGTTATTTCAACCTGATATGTTACTACAAATGATGCAAAGAGACGAAATTCTC
CGAGAGTTTATTTATAGTTATCAAAATGAAAAAATACTGCCATGGTATTTAGAAATATTAGAACGAGCGCAGCGCAATAA
TGAAATTAATCCTCATCTTACTAAAGAAATGATGTTACTTTACATTCAAATGTTTACTAAATTAGGTGATGATTTCGGGG
CACAGCTTCTTGAAGGAGATCGTGAAAAACATATTCAAGATATTGTCACTATGTTTTTCTATGGTCTTTCTGTTCCACAA
AAATAA

Upstream 100 bases:

>100_bases
TCAAATGTAATATGAAACAAGCCTTTTCCGTTCGAAAATTGTTTTGTGACATTTTGAACTGAAATCATAAATCCACCTCA
TTTTTTGAAATATTTAATGT

Downstream 100 bases:

>100_bases
AAAGACACGAAACTCGTGTCTTTTTATTTTATAAATATGATTCTACCTGTTTCACTACTTTCAACCGCTAATTGAATCAA
CTTAATTACTTCTAAACCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVSTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K

Sequences:

>Translated_241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVSTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K
>Mature_241_residues
MIFQNYCTPPLPYSQQLFEIFICPYFKNIVSTYIFLYIFIEVIVLNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHI
AKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEKLPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEIL
REFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKHIQDIVTMFFYGLSVPQ
K

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28919; Mature: 28919

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA