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The map label for this gene is ysdA [H]

Identifier: 49186359

GI number: 49186359

Start: 3325090

End: 3325338

Strand: Reverse

Name: ysdA [H]

Synonym: BAS3354

Alternate gene names: 49186359

Gene position: 3325338-3325090 (Counterclockwise)

Preceding gene: 49186360

Following gene: 49186358

Centisome position: 63.6

GC content: 37.35

Gene sequence:

>249_bases
ATGAAATGGATTTATTTTATTCTTATTAACGTTATAGCTTTTAGCCTTATGGGGCTTGATAAACGGAAAGCGAAGAAGAA
ACAGTGGAGAACGCCAGAAAGTACGTTGTTTTTATCAGCGGCAGCTGGGGGCGCAGTTGGTGCTTGGATCGGTATGTATA
CGTTTCACCATAAAACTCATAAAAAGAAATTTGTTTTCGGTATACCGTTACTTGTCGTTATCACAATATGTTTACTTTTT
GCTGTATGA

Upstream 100 bases:

>100_bases
AAGTAATGAATTAAACTAGTTTGATAAAAAGTGTTCTTCAGTTGTTTCCATCGTTTTTTCATGTTACGATTAAGCGAATT
TTTCATAGGGAGAGAAAGCG

Downstream 100 bases:

>100_bases
GAAATGTCGAAAGAATTGCAGATTGATTATTGGTAAAGTGAGCACGTGGGACCGTATAATGGAGAAAAACGAGAAGAGGA
GAAAAGGAAGATGGGGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKWIYFILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYTFHHKTHKKKFVFGIPLLVVITICLLF
AV

Sequences:

>Translated_82_residues
MKWIYFILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYTFHHKTHKKKFVFGIPLLVVITICLLF
AV
>Mature_82_residues
MKWIYFILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYTFHHKTHKKKFVFGIPLLVVITICLLF
AV

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9312; Mature: 9312

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIYFILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYTFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITICLLFAV
CCHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWIYFILINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYTFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITICLLFAV
CCHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]