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The map label for this gene is yjbG [H]

Identifier: 49186298

GI number: 49186298

Start: 3258697

End: 3260484

Strand: Direct

Name: yjbG [H]

Synonym: BAS3293

Alternate gene names: 49186298

Gene position: 3258697-3260484 (Clockwise)

Preceding gene: 49186297

Following gene: 49186300

Centisome position: 62.32

GC content: 33.84

Gene sequence:

>1788_bases
ATGACAGAACTTAAAGATCGACTACAAGTAGCTGATAAAGAAAAGTGGAATTTAACGGATATTTACGATACCATTGAAGA
TTGGGAAAGTGATTTTCATAAAATTGAAGTATTAACGAATGAATTACACGAGTTTAATGGAAATATTCACGATGGCAATA
GTTTATTAGCCTATTTAACAAAGAGTGAAGAAATTTCTAGCATAATATCTTTAATGTTCGCTTATGCACGATTACAATCT
GATCTTGATACGCGCGATACTGACGCCCAATCTCTTGTTGATAAAGTGTCACAATTGCACGTGAAAGTAAGTGCGGCTAA
ATCTTTCTTTTCTCCATTCTTACTTAGCGTAGATGAAAACACATTACACACTTACATAGAAGAAGCAGAAGGCTTACAAT
ATTATAAAGAAGACTTATTTGAATTATATCGTTATAAAAAACACGTATTGAATAAGGACCAAGAAGAAATTTTATCACAA
ATGGGCGAAGCACTTTCCTCTCCTCAGCATACATATGGCATGTTAAATAATGCAGATATACTATTTGGTGAAGTGACTAG
TAATGATGGAGAAAAAGTTACTTTAACACGAGGAATGTATGCAAAGTTAATAGAAGATGAGAGCCGCGAAAAACGTAAAG
AAGCCTATAAAGCTTATTACAAGCCATACGTTCAATTGAAAAATTCTATCGCTTCTACTTTATCTGCTGCTATTAAAAAT
AATGTTACTGTTTCTAAGCTAAGAAAATATCCATCAGCCCTAGAAAAATCATTATTTGGTGACATGGTTCCGAAAGAAGT
ATATGAAAATTTAATTGAAACGACGAAAAAAAACATTCAATCTTTACATACATATAATAAACTTCGAAAAGAGAAATTAA
ATGTCGATGAACTAAGACAATATGACTTAAGTGTCGATTTAGTACAAGGTGTAAAACAAGACATTCCATATGATAACGCG
TTTGACATCATGATTGAATCACTAGCTCCTTTAGGTGAAGAATATATTGAAACATTAAAAAGCTTTAAAGATAAACGTTA
TATTGACGTAAGAGAAACGCCAGGAAAATGTTCCGGTGCTTATAACTTTGGTGTATACGGCGTTCATCCTTTCATTCTTT
TAAATCATCATGATGATTTAAATAGCCTTTTCACTCTTACTCACGAATGTGGGCACGGTATGCATACGCACTACTCACAC
GGATACCAACCAAGAATTTCTGCACACTATACTATCTTTGTCGCAGAGGTCGCTTCTACAGTAAATGAAGTGCTATTAAT
TCATCATTTATTAAAAGAAGCAAAAGATGCTAACGTACGTAACCATTTAGTAAACCATTTCATTGAGAAATTTAAAGGCA
CTTTCTTTACACAAATCATGTTCGCTGAATTTGAAAAAATCACGCATGAAATGGCACAGCAAGGTAAACCATTAAATGCC
CAAGTCTTTAGCGACGTTTATGAAAACTTGTTCAGAGAGTATAATGGCGACTCTCTCGTATTTGACGAAGAAGTAAAATA
CGGATGGGCTAGAATACCGCATTTCTACCGTCCATTTTACGTATACAAATACGCAACTGGATTCGCTTCTGCAATCCAAA
TTGCTGATAAATTATTAAGCGGCGATCCAAATGCACAGAAAAACTATCTCGAATTCCTTAAAGGTGGAAGTTCAGATTAT
CCATTAAATCTACTGAAAAAAGCTGGCGTTGATTTAACTACGCCAGAACCGATTGAAAGTGCATTAAATCGTTTTAGTGA
ACTTGTTGAAGAGTTTTCAACTTTATAA

Upstream 100 bases:

>100_bases
TGTTAGCAAGGCTTTTTAATTTTCAGCAGGGATTTTTTGCAATTTGTTGTATTTCATAGTTATATAGAAATATAACTACA
TATTTAGAAAGGAAATGATT

Downstream 100 bases:

>100_bases
AAAAGAAGAGCCTCTCGCTAGAGGCTCTTTCTCTTTCATGCTCCGTTTCCTTCTATTAAATCATTCGCCATTTTCCTAAA
CTCTTGATTAAATGTATCAT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MTELKDRLQVADKEKWNLTDIYDTIEDWESDFHKIEVLTNELHEFNGNIHDGNSLLAYLTKSEEISSIISLMFAYARLQS
DLDTRDTDAQSLVDKVSQLHVKVSAAKSFFSPFLLSVDENTLHTYIEEAEGLQYYKEDLFELYRYKKHVLNKDQEEILSQ
MGEALSSPQHTYGMLNNADILFGEVTSNDGEKVTLTRGMYAKLIEDESREKRKEAYKAYYKPYVQLKNSIASTLSAAIKN
NVTVSKLRKYPSALEKSLFGDMVPKEVYENLIETTKKNIQSLHTYNKLRKEKLNVDELRQYDLSVDLVQGVKQDIPYDNA
FDIMIESLAPLGEEYIETLKSFKDKRYIDVRETPGKCSGAYNFGVYGVHPFILLNHHDDLNSLFTLTHECGHGMHTHYSH
GYQPRISAHYTIFVAEVASTVNEVLLIHHLLKEAKDANVRNHLVNHFIEKFKGTFFTQIMFAEFEKITHEMAQQGKPLNA
QVFSDVYENLFREYNGDSLVFDEEVKYGWARIPHFYRPFYVYKYATGFASAIQIADKLLSGDPNAQKNYLEFLKGGSSDY
PLNLLKKAGVDLTTPEPIESALNRFSELVEEFSTL

Sequences:

>Translated_595_residues
MTELKDRLQVADKEKWNLTDIYDTIEDWESDFHKIEVLTNELHEFNGNIHDGNSLLAYLTKSEEISSIISLMFAYARLQS
DLDTRDTDAQSLVDKVSQLHVKVSAAKSFFSPFLLSVDENTLHTYIEEAEGLQYYKEDLFELYRYKKHVLNKDQEEILSQ
MGEALSSPQHTYGMLNNADILFGEVTSNDGEKVTLTRGMYAKLIEDESREKRKEAYKAYYKPYVQLKNSIASTLSAAIKN
NVTVSKLRKYPSALEKSLFGDMVPKEVYENLIETTKKNIQSLHTYNKLRKEKLNVDELRQYDLSVDLVQGVKQDIPYDNA
FDIMIESLAPLGEEYIETLKSFKDKRYIDVRETPGKCSGAYNFGVYGVHPFILLNHHDDLNSLFTLTHECGHGMHTHYSH
GYQPRISAHYTIFVAEVASTVNEVLLIHHLLKEAKDANVRNHLVNHFIEKFKGTFFTQIMFAEFEKITHEMAQQGKPLNA
QVFSDVYENLFREYNGDSLVFDEEVKYGWARIPHFYRPFYVYKYATGFASAIQIADKLLSGDPNAQKNYLEFLKGGSSDY
PLNLLKKAGVDLTTPEPIESALNRFSELVEEFSTL
>Mature_594_residues
TELKDRLQVADKEKWNLTDIYDTIEDWESDFHKIEVLTNELHEFNGNIHDGNSLLAYLTKSEEISSIISLMFAYARLQSD
LDTRDTDAQSLVDKVSQLHVKVSAAKSFFSPFLLSVDENTLHTYIEEAEGLQYYKEDLFELYRYKKHVLNKDQEEILSQM
GEALSSPQHTYGMLNNADILFGEVTSNDGEKVTLTRGMYAKLIEDESREKRKEAYKAYYKPYVQLKNSIASTLSAAIKNN
VTVSKLRKYPSALEKSLFGDMVPKEVYENLIETTKKNIQSLHTYNKLRKEKLNVDELRQYDLSVDLVQGVKQDIPYDNAF
DIMIESLAPLGEEYIETLKSFKDKRYIDVRETPGKCSGAYNFGVYGVHPFILLNHHDDLNSLFTLTHECGHGMHTHYSHG
YQPRISAHYTIFVAEVASTVNEVLLIHHLLKEAKDANVRNHLVNHFIEKFKGTFFTQIMFAEFEKITHEMAQQGKPLNAQ
VFSDVYENLFREYNGDSLVFDEEVKYGWARIPHFYRPFYVYKYATGFASAIQIADKLLSGDPNAQKNYLEFLKGGSSDYP
LNLLKKAGVDLTTPEPIESALNRFSELVEEFSTL

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68503; Mature: 68372

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELKDRLQVADKEKWNLTDIYDTIEDWESDFHKIEVLTNELHEFNGNIHDGNSLLAYLT
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KSEEISSIISLMFAYARLQSDLDTRDTDAQSLVDKVSQLHVKVSAAKSFFSPFLLSVDEN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TLHTYIEEAEGLQYYKEDLFELYRYKKHVLNKDQEEILSQMGEALSSPQHTYGMLNNADI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCCCCCE
LFGEVTSNDGEKVTLTRGMYAKLIEDESREKRKEAYKAYYKPYVQLKNSIASTLSAAIKN
EEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVTVSKLRKYPSALEKSLFGDMVPKEVYENLIETTKKNIQSLHTYNKLRKEKLNVDELRQ
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YDLSVDLVQGVKQDIPYDNAFDIMIESLAPLGEEYIETLKSFKDKRYIDVRETPGKCSGA
HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCC
YNFGVYGVHPFILLNHHDDLNSLFTLTHECGHGMHTHYSHGYQPRISAHYTIFVAEVAST
CCCCEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VNEVLLIHHLLKEAKDANVRNHLVNHFIEKFKGTFFTQIMFAEFEKITHEMAQQGKPLNA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
QVFSDVYENLFREYNGDSLVFDEEVKYGWARIPHFYRPFYVYKYATGFASAIQIADKLLS
HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHC
GDPNAQKNYLEFLKGGSSDYPLNLLKKAGVDLTTPEPIESALNRFSELVEEFSTL
CCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TELKDRLQVADKEKWNLTDIYDTIEDWESDFHKIEVLTNELHEFNGNIHDGNSLLAYLT
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH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CCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]