Click here to switch to the map view.

The map label for this gene is ybxG [H]

Identifier: 49186267

GI number: 49186267

Start: 3228185

End: 3229603

Strand: Reverse

Name: ybxG [H]

Synonym: BAS3262

Alternate gene names: 49186267

Gene position: 3229603-3228185 (Counterclockwise)

Preceding gene: 49186268

Following gene: 49186264

Centisome position: 61.77

GC content: 38.76

Gene sequence:

>1419_bases
ATGAATCATCTAAGAGGGGGAAGTGAAGTGGCAAACAAAGAATTGAAAAGAGGTTTAGAAGCACGTCATATTCAAATGAT
TGCTTTAGGCGGAACGATTGGTGTTGGTTTGTTTATGGGGTCAGCCAGCACAATTAAATGGACAGGTCCGTCAGTTATGC
TTGCGTATGCAATTGCAGGTATTTTTATCTTCTTCATCATGCGTGCCATGGGAGAAATGTTGTATATGGAGCCAAGTACA
GGTTCATTTGCGACATTCGGTCATAAGTATATTCATCCGCTAGCTGGTTATATGACAGCGTGGAGCAACTGGTTCCAGTG
GGTTATCGTTGGGATGTCAGAGATTATCGCGGTTGGAGCGTATATGCAATATTGGTTCCCGGATTTACCAGCTTGGATAC
CAGGTGTAATCGCAATGGTTATTCTTGGCGCAGCTAACTTAATTTCTGTTAAGTCATTTGGTGAATTTGAATTTTGGTTT
GCGATGATTAAAATCGTTACGATTCTATTAATGATTATTGCGGGATTTGGACTTATTTTCTTTGGAATTGGTAACGGCGG
AGAAGCGATTGGCATATCGAATCTTTGGTCAAATGGCGGTTTCTTTACAGGTGGTTTTTCTGGATTCTTCTTTGCATTAT
CACTTGTAGTTGGAGCGTATCAAGGTGTGGAATTAATCGGTATTACTGCTGGTGAAGCGAAGGATCCGAAGAAGACACTT
ACAAGAGCGATTCAAAGTACAATTTGGCGTATTTTAATTTTCTACATCGGTGCGATTTTCGTTATTGTAACTGTGTATCC
GTGGGATCAATTAAGTACAATTGGAAGTCCATTCGTAGCAACTTTTGCGAAAGTTGGTATTACGGCTGCTGCGGGATTAA
TTAACTTTGTTGTTATCACAGCAGCAATGTCTGGTTGTAATAGTGGTATTTATAGTGCTGGTCGTATGCTATATACGTTA
GGTGTAAATGGACAAGCACCGAAATATTTCACGAAACTTTCTGGAAATGGTGTACCTTTATTCGGTACAGTTGGCGTAAT
TATCGGTTTAGCGGTCGGTGTAGTTCTAAGTTATATTGCACCAAAAAACTTATTCGTATATGTATATAGTGCGAGTGTAC
TTCCTGGTATGGTACCATGGTTTGTCATTTTAATTAGCCAAATTAATTTTAGAAAAGAAAAGGGAGCAGAGATGAAAGAT
CATCCGTTCAAAATGCCGTTTGCTCCTGTTACAAACTATTTAACAATTGCCTTTTTAATTATGGTATTAGTCGGAATGTG
GTTTAACGATGATACGCGTATTTCATTAGTTGTAGGTATTGTTTTCTTAGCTATCGTAACAATTAGTTTCTATGCTTTCG
GAATAGGGAAACGACCTCCGTTAGATGTTCCAAATGATCAAGAGATTTCAAGCAAATAA

Upstream 100 bases:

>100_bases
ATTTTAGGATAGCTTTAAAGCTAGTGTAAAATGACGTTTGCTTCATCATTTTCAGGGCCGAAAGGAATTAGGGGAAAGCA
TCTTGTTTTAAAATGCGGCT

Downstream 100 bases:

>100_bases
AGATAGTAAAAAGTCCGATTTCTAAATGAGAAATCGGACTTTTTGTTATTAAAACTTTTCTAAAACGATTTTCCCAATTG
TACTTCCGCTTTCAAGCAGA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK

Sequences:

>Translated_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
>Mature_472_residues
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAGIFIFFIMRAMGEMLYMEPST
GSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGAYMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWF
AMIKIVTILLMIIAGFGLIFFGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVITAAMSGCNSGIYSAGRMLYTL
GVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIAPKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKD
HPFKMPFAPVTNYLTIAFLIMVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=450, Percent_Identity=62, Blast_Score=562, Evalue=1e-161,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=43.7362637362637, Blast_Score=374, Evalue=1e-104,
Organism=Escherichia coli, GI1786602, Length=441, Percent_Identity=47.8458049886621, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1790653, Length=432, Percent_Identity=44.4444444444444, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1786302, Length=438, Percent_Identity=40.4109589041096, Blast_Score=341, Evalue=6e-95,
Organism=Escherichia coli, GI87081915, Length=454, Percent_Identity=36.784140969163, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI87081708, Length=441, Percent_Identity=36.5079365079365, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1788480, Length=437, Percent_Identity=36.6132723112128, Blast_Score=281, Evalue=5e-77,
Organism=Escherichia coli, GI1789017, Length=433, Percent_Identity=34.6420323325635, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI87082023, Length=476, Percent_Identity=25.6302521008403, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081869, Length=454, Percent_Identity=22.4669603524229, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324061, Length=450, Percent_Identity=33.5555555555556, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6320772, Length=445, Percent_Identity=33.7078651685393, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6324990, Length=428, Percent_Identity=32.9439252336449, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=31.7460317460317, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6324924, Length=422, Percent_Identity=31.2796208530806, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322892, Length=418, Percent_Identity=31.1004784688995, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6324553, Length=411, Percent_Identity=31.6301703163017, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322967, Length=411, Percent_Identity=28.7104622871046, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6321629, Length=426, Percent_Identity=26.5258215962441, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6321053, Length=420, Percent_Identity=28.5714285714286, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6319824, Length=398, Percent_Identity=29.6482412060301, Blast_Score=154, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6319608, Length=421, Percent_Identity=28.2660332541568, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=411, Percent_Identity=28.4671532846715, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319543, Length=416, Percent_Identity=26.6826923076923, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6320717, Length=400, Percent_Identity=26.75, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6319542, Length=408, Percent_Identity=26.9607843137255, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6324981, Length=414, Percent_Identity=28.9855072463768, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320364, Length=496, Percent_Identity=23.1854838709677, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51163; Mature: 51163

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHLRGGSEVANKELKRGLEARHIQMIALGGTIGVGLFMGSASTIKWTGPSVMLAYAIAG
CCCCCCCHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IFIFFIMRAMGEMLYMEPSTGSFATFGHKYIHPLAGYMTAWSNWFQWVIVGMSEIIAVGA
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMQYWFPDLPAWIPGVIAMVILGAANLISVKSFGEFEFWFAMIKIVTILLMIIAGFGLIF
HHHHHCCCCCHHHHHHHHHHHHCCHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
FGIGNGGEAIGISNLWSNGGFFTGGFSGFFFALSLVVGAYQGVELIGITAGEAKDPKKTL
EEECCCCCEEEEHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
TRAIQSTIWRILIFYIGAIFVIVTVYPWDQLSTIGSPFVATFAKVGITAAAGLINFVVIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAMSGCNSGIYSAGRMLYTLGVNGQAPKYFTKLSGNGVPLFGTVGVIIGLAVGVVLSYIA
HHHHHCCCCHHHCCCEEEEECCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHC
PKNLFVYVYSASVLPGMVPWFVILISQINFRKEKGAEMKDHPFKMPFAPVTNYLTIAFLI
CCCEEEEEEECHHCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
MVLVGMWFNDDTRISLVVGIVFLAIVTISFYAFGIGKRPPLDVPNDQEISSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]