Click here to switch to the map view.

The map label for this gene is atoE [H]

Identifier: 49186115

GI number: 49186115

Start: 3088937

End: 3090283

Strand: Direct

Name: atoE [H]

Synonym: BAS3110

Alternate gene names: 49186115

Gene position: 3088937-3090283 (Clockwise)

Preceding gene: 49186110

Following gene: 49186120

Centisome position: 59.08

GC content: 38.98

Gene sequence:

>1347_bases
TTGTTTCGTTCTTTTACTAATGGTTGCGTCGCCTTAGTGCAACGTTTCTTGCCAGAACCGTTTATATTATCATGTTTATT
AACTGTTTTTGTTATTTTCTTCGGCATGTTTGCAACGCATCAAACACCTGTGGAAATGATTAATCACTGGGGTAATGGCA
TTTGGGGACTTCTCGCCTTTTCTATGCAAATGGCACTTGTACTCGTGACAGGATCTGCTTTAGCAAACGCTCCTCTTATT
AAAAAAGGATTAATGAAAGCGGCAAGACTACCAAAAACAAATGGACAAGGTATTATTGCCATTTCAATCGTAAGTTTACT
AGGGGCATACATAAACTGGGGATTTGGTATTGTTGTATCTGTTTTATACGCAAAAGAAGTGGCAAGACAATTAGAAGGAT
TGGATTATAGACTAGCAATCGCTTCTTCTTACTCTGGATTTCTCATTTGGCATGCGGGGCTTTCTGCTTCTATCCCTCTT
ACGTTAGCAACAGGCGGAGAAACGTTAATGAAAACGACAGCTGGAAGTATTAAAGAAGCGATTCCAATCACTGAAACGTT
ATTCTCACCATATGCTCTCGTTCCAGTTATTATCTTTTTAGTTACGATGCCTCTCATTAATAAGGCGATGCATCCAGATG
CAAAACATACAATAACAGTAGATCCTAGCGTATTCCATGAAGAAGCTGCCGCTCAAGAGGCAGGAAAAAATACGTTCGCG
GAAAAAATGGAAAATAGCATTATTATTACACTTTGCGTTGGATTGTTAGGTCTCATTTATATTTTCAACTACTTTTATAC
GAAAGGCTTTAACCTTACACTCGATATCGTTATTTTTATGTTATTAATTGCTGGACTCATTTTCCACCGTACTCCAATTC
AATATATTCGCGCTTTTTCAGATTCCACGAAAAGTGCTTCTGGTATTTTACTTCAATTTCCGTTTTACGCAGGAATTATG
GGGATGATGATCGGAGCAAATAGTGAAGGCCTTTCACTTGGAGGAGCTATTTCGAATTTCTTTATTAGCATTTCAAACGA
AACAACTTTCCCGCTCTTTACTTTTTTAAGTGCGGGCATCGTTAATATTTTCGTTCCATCTGGTGGCGGTCAATGGGCTG
TGCAAGCACCCATTATGATTCCAGCTGGCGCTGAACTTGGTGTACCTGCTGCAAAAACAGCAATGGCCATTGCGTGGGGC
GATGCTTGGACAAATTTAATTCAACCTTTCTGGGCATTACCAGCATTAGCGATAGCTGGTTTAGGTGCTCGTGATATTAT
GGGATTTTGCGTTGTGAACTTACTATATGCAGGATTTATCATAAGTCTATGTTTCTTATTTATTTAA

Upstream 100 bases:

>100_bases
CTATCCCTTTAAAAATATCAGAATTTTCTATTTTTAAAAGGTTATGAACGAAACAACCTCGAATAATTGTAATACATATA
CATAAGGAGGTTGATCTATT

Downstream 100 bases:

>100_bases
ACGAAAAGCTAGTTTTATACTAGCTTTTTTACATAATAAATCATTTATTTCCCACGCAATTTATCACGGTCTTCCACTCT
ATCTCCGTAAGATATAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLMKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDAKHTITVDPSVFHEEAAAQEAGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI

Sequences:

>Translated_448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLMKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDAKHTITVDPSVFHEEAAAQEAGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI
>Mature_448_residues
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAFSMQMALVLVTGSALANAPLI
KKGLMKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVSVLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPL
TLATGGETLMKTTAGSIKEAIPITETLFSPYALVPVIIFLVTMPLINKAMHPDAKHTITVDPSVFHEEAAAQEAGKNTFA
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFSDSTKSASGILLQFPFYAGIM
GMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGIVNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWG
DAWTNLIQPFWALPALAIAGLGARDIMGFCVVNLLYAGFIISLCFLFI

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=430, Percent_Identity=46.046511627907, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 48228; Mature: 48228

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
SMQMALVLVTGSALANAPLIKKGLMKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVS
HHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPLTLATGGETLMKTTAGSIKEA
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHH
IPITETLFSPYALVPVIIFLVTMPLINKAMHPDAKHTITVDPSVFHEEAAAQEAGKNTFA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCHHHH
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DSTKSASGILLQFPFYAGIMGMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGI
CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCE
VNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWGDAWTNLIQPFWALPALAIAG
EEEEEECCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHC
LGARDIMGFCVVNLLYAGFIISLCFLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFRSFTNGCVALVQRFLPEPFILSCLLTVFVIFFGMFATHQTPVEMINHWGNGIWGLLAF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
SMQMALVLVTGSALANAPLIKKGLMKAARLPKTNGQGIIAISIVSLLGAYINWGFGIVVS
HHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
VLYAKEVARQLEGLDYRLAIASSYSGFLIWHAGLSASIPLTLATGGETLMKTTAGSIKEA
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHH
IPITETLFSPYALVPVIIFLVTMPLINKAMHPDAKHTITVDPSVFHEEAAAQEAGKNTFA
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCHHHH
EKMENSIIITLCVGLLGLIYIFNYFYTKGFNLTLDIVIFMLLIAGLIFHRTPIQYIRAFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
DSTKSASGILLQFPFYAGIMGMMIGANSEGLSLGGAISNFFISISNETTFPLFTFLSAGI
CCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCE
VNIFVPSGGGQWAVQAPIMIPAGAELGVPAAKTAMAIAWGDAWTNLIQPFWALPALAIAG
EEEEEECCCCCEEEECCEEECCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHC
LGARDIMGFCVVNLLYAGFIISLCFLFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]