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The map label for this gene is ctc [H]

Identifier: 49186098

GI number: 49186098

Start: 3074081

End: 3075163

Strand: Direct

Name: ctc [H]

Synonym: BAS3093

Alternate gene names: 49186098

Gene position: 3074081-3075163 (Clockwise)

Preceding gene: 49186096

Following gene: 49186100

Centisome position: 58.79

GC content: 35.27

Gene sequence:

>1083_bases
ATGAACAGAAAAACAAGTAAAGTTAAAAAGTTTTTGGGATTCGTACTAACCGCAGCATTAGCAACTACAACGATGGTAGG
TACAGCAAATGCACAAACAACTACGAATAGCTATAAGGTAGCTAGCAATGAGAACACTGTATTTACAGATGTACCAAAAG
ACCACTGGTCAAAAGATGCTATTGATTACTTAGCGGCAGCAGGGATTTATAAGGGATATGGAAATGGGAAGTTTGGTTTT
GGGGACAACATTACTAGAGGACAGGTAGCTTCTTTAGTCAATCGACATTTAGGTTTAATTGCAGACGATAAACAAGGAAA
TATGTTTAGTGATATTACAAATCATATGTTCGAAAAAGATATTAAAGCCATTGCGCAAGCTGGAATTATGACAGGTGATG
GAACAGGTACATTTCGTCCTGATGATGTATTAACTCGTTATGAGATGGCAGTAATATTACAAAAAGCATTTCATTTAGAA
TCAAAAGAACAAGGGAAATTTAAAGACGTACCAAAAGGTCATTGGGCTTATGAAGCTGTAAATACACTGCGTAGTAACCG
TATAGCACAAGGTGACGAGGCAGGTAATTTTAACGGAAATACATTTGTGAAGCGTGAGCAATATGCACAATTTTTCTATA
ATGCAATAGCAAAAAACAGAGATTATAATTTCAACATCAATTCAAAAGAAGAAATGAAACAAATGTTAACAACAGCTTTA
GAGAATGGGACGTTTGGTCCATTTCAATTAGATGTATTAGGTAAAGATCTATCTGACGTAAAAAAAGAATATGGGGTGCC
TGATGTTTGGAAGAAAGCACCTTGTACAGAATGTGATGCACCTAATATAGCGGTATACGGCGATTATAATATTGACATGT
ACCCTTCGGACGCTAGATATATATCGGTGAAAATGGATATCACTATTAATGAATTAAAAGAATGGTTTGGTGAGCCAGAT
GGAATCGGAGAGGATATGACTAGTGAAGGCTTCATATATAATCGAGGAAGCTATTCTCTTTATTTCAGCTTCTCTGATGG
TTATATTCAACGCGCTGAAATATCTAAAAATAAATTTAATTAA

Upstream 100 bases:

>100_bases
TTTCATTACTTATATGTTATAATCACGATGTAAACATTTAAGTATATTAAATGTTTACTAAGGTTATTCAATACGTTTCA
TATAACAAGGGGGTTCACAA

Downstream 100 bases:

>100_bases
TATGTTACAAGCAATATAAAATATATAAAGCATAAAAAAATCCTTCAAGAACATGCCTTTTCTTGAAGGATTTTATTTTT
TCCTATCTATTTTATATAGT

Product: S-layer protein

Products: NA

Alternate protein names: Parasporal protein [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNRKTSKVKKFLGFVLTAALATTTMVGTANAQTTTNSYKVASNENTVFTDVPKDHWSKDAIDYLAAAGIYKGYGNGKFGF
GDNITRGQVASLVNRHLGLIADDKQGNMFSDITNHMFEKDIKAIAQAGIMTGDGTGTFRPDDVLTRYEMAVILQKAFHLE
SKEQGKFKDVPKGHWAYEAVNTLRSNRIAQGDEAGNFNGNTFVKREQYAQFFYNAIAKNRDYNFNINSKEEMKQMLTTAL
ENGTFGPFQLDVLGKDLSDVKKEYGVPDVWKKAPCTECDAPNIAVYGDYNIDMYPSDARYISVKMDITINELKEWFGEPD
GIGEDMTSEGFIYNRGSYSLYFSFSDGYIQRAEISKNKFN

Sequences:

>Translated_360_residues
MNRKTSKVKKFLGFVLTAALATTTMVGTANAQTTTNSYKVASNENTVFTDVPKDHWSKDAIDYLAAAGIYKGYGNGKFGF
GDNITRGQVASLVNRHLGLIADDKQGNMFSDITNHMFEKDIKAIAQAGIMTGDGTGTFRPDDVLTRYEMAVILQKAFHLE
SKEQGKFKDVPKGHWAYEAVNTLRSNRIAQGDEAGNFNGNTFVKREQYAQFFYNAIAKNRDYNFNINSKEEMKQMLTTAL
ENGTFGPFQLDVLGKDLSDVKKEYGVPDVWKKAPCTECDAPNIAVYGDYNIDMYPSDARYISVKMDITINELKEWFGEPD
GIGEDMTSEGFIYNRGSYSLYFSFSDGYIQRAEISKNKFN
>Mature_360_residues
MNRKTSKVKKFLGFVLTAALATTTMVGTANAQTTTNSYKVASNENTVFTDVPKDHWSKDAIDYLAAAGIYKGYGNGKFGF
GDNITRGQVASLVNRHLGLIADDKQGNMFSDITNHMFEKDIKAIAQAGIMTGDGTGTFRPDDVLTRYEMAVILQKAFHLE
SKEQGKFKDVPKGHWAYEAVNTLRSNRIAQGDEAGNFNGNTFVKREQYAQFFYNAIAKNRDYNFNINSKEEMKQMLTTAL
ENGTFGPFQLDVLGKDLSDVKKEYGVPDVWKKAPCTECDAPNIAVYGDYNIDMYPSDARYISVKMDITINELKEWFGEPD
GIGEDMTSEGFIYNRGSYSLYFSFSDGYIQRAEISKNKFN

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 40339; Mature: 40339

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKTSKVKKFLGFVLTAALATTTMVGTANAQTTTNSYKVASNENTVFTDVPKDHWSKDA
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCEEEECCCHHHCCHHH
IDYLAAAGIYKGYGNGKFGFGDNITRGQVASLVNRHLGLIADDKQGNMFSDITNHMFEKD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH
IKAIAQAGIMTGDGTGTFRPDDVLTRYEMAVILQKAFHLESKEQGKFKDVPKGHWAYEAV
HHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
NTLRSNRIAQGDEAGNFNGNTFVKREQYAQFFYNAIAKNRDYNFNINSKEEMKQMLTTAL
HHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
ENGTFGPFQLDVLGKDLSDVKKEYGVPDVWKKAPCTECDAPNIAVYGDYNIDMYPSDARY
HCCCCCCEEEEECCCCHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCEECCCCCEE
ISVKMDITINELKEWFGEPDGIGEDMTSEGFIYNRGSYSLYFSFSDGYIQRAEISKNKFN
EEEEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEHHCCCCCCC
>Mature Secondary Structure
MNRKTSKVKKFLGFVLTAALATTTMVGTANAQTTTNSYKVASNENTVFTDVPKDHWSKDA
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCEEEECCCHHHCCHHH
IDYLAAAGIYKGYGNGKFGFGDNITRGQVASLVNRHLGLIADDKQGNMFSDITNHMFEKD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH
IKAIAQAGIMTGDGTGTFRPDDVLTRYEMAVILQKAFHLESKEQGKFKDVPKGHWAYEAV
HHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
NTLRSNRIAQGDEAGNFNGNTFVKREQYAQFFYNAIAKNRDYNFNINSKEEMKQMLTTAL
HHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
ENGTFGPFQLDVLGKDLSDVKKEYGVPDVWKKAPCTECDAPNIAVYGDYNIDMYPSDARY
HCCCCCCEEEEECCCCHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCCCEECCCCCEE
ISVKMDITINELKEWFGEPDGIGEDMTSEGFIYNRGSYSLYFSFSDGYIQRAEISKNKFN
EEEEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA