Click here to switch to the map view.

The map label for this gene is ybcF [H]

Identifier: 49185962

GI number: 49185962

Start: 2927718

End: 2928230

Strand: Reverse

Name: ybcF [H]

Synonym: BAS2957

Alternate gene names: 49185962

Gene position: 2928230-2927718 (Counterclockwise)

Preceding gene: 49185963

Following gene: 49185961

Centisome position: 56.0

GC content: 31.97

Gene sequence:

>513_bases
ATGAATGCAAAGAATAAAAAGGTTTTATTGTTAACAGACATGGAACACGGAATAGAGCCTATCATACAACAAGTAACTAA
CATTCAACGAGAAAATATGTTGACTATACACAGCTGCGATTCTGTAATTGTACATCCTTTTGGAGATATAATGAGGTCTA
TTATTATCGCTATTTATCAAGAAAATGTGGAAGAAATTTTTGTTGTCGGAATAGAGGATAAAAAAACAGATGTAGTTAAT
TTACAAATCCAACGTGATTCCATAAAAAATAACAAGGAACTAGATTATCTCTTTGAAAATTGCATGCCTGAATTTTCAAA
TGGTAGCCTTGAGGAATGGCTAAGTGGAAAAGAAAATGTTAGTGAAAATATTGAGAAGAGCATAGATATGATTCGTCATC
ATCCATTAGTACCTTCTGATGTTAAAGTTCATGGCTTCATGATTGATAAAACAGGTGGAAAAGAAACGGTGGTTAAAGTT
TCTGCTAATAAAGTAGCTGAATGCATGAATTAA

Upstream 100 bases:

>100_bases
GACGTTGGAAAAATTGGTAACAATTATGTAATGAATACTCAACAATTGTTACTAGTTTAAAAAGTTCTATAAATACAATC
ATGAAGAAGGAGTGCTATAT

Downstream 100 bases:

>100_bases
TTTATTAAGGACAAATAAATTTTTATGTATGAATTGCTGTTGTATAATAAAATTTACCCCGCATTACCCCCACCTCAAAA
ATCAACGGAAGCAAAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNAKNKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKKTDVVN
LQIQRDSIKNNKELDYLFENCMPEFSNGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN

Sequences:

>Translated_170_residues
MNAKNKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKKTDVVN
LQIQRDSIKNNKELDYLFENCMPEFSNGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN
>Mature_170_residues
MNAKNKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKKTDVVN
LQIQRDSIKNNKELDYLFENCMPEFSNGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN

Specific function: Unknown

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: NA

Molecular weight: Translated: 19338; Mature: 19338

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKNKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQ
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHHHH
ENVEEIFVVGIEDKKTDVVNLQIQRDSIKNNKELDYLFENCMPEFSNGSLEEWLSGKENV
CCCCEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH
SENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKVSANKVAECMN
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCC
>Mature Secondary Structure
MNAKNKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQ
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHHHH
ENVEEIFVVGIEDKKTDVVNLQIQRDSIKNNKELDYLFENCMPEFSNGSLEEWLSGKENV
CCCCEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH
SENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKVSANKVAECMN
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]