Click here to switch to the map view.

The map label for this gene is yqcI [H]

Identifier: 49185910

GI number: 49185910

Start: 2873209

End: 2873967

Strand: Direct

Name: yqcI [H]

Synonym: BAS2904

Alternate gene names: 49185910

Gene position: 2873209-2873967 (Clockwise)

Preceding gene: 49185906

Following gene: 49185911

Centisome position: 54.95

GC content: 35.84

Gene sequence:

>759_bases
ATGACTATACTTTATGATAAAGACTCTTTACAAAAAAATATTATTACCCTTCCACATTGGCAACAAGAAGCTTTCGGTTC
TTTCCAATTAAAAATGACAGATAAAAATAAACCTTTCCCTTGTATCCCAGCCCAACACGGCTTTACAGCAAATCACCTCA
GGTACGGGTTCATTGATGACCCTAGAGATACGAATACTAGCGAGGATTTTGCTGCATTACTTAAAGAATATACTGAATGT
TCTAGAGACACAGGTCAATACGCCTCACTTATTGTTTTTATTCATACACCAATAGATTTACTGCGAGAAACTACAGTTGA
AGATTTTGAACATATGTATTGGTCTCTACTTAATACAACTAGTCGTTTGGACGAGATGGAATGGCCTACACACATTCCAA
ATGACCCTATGGAGAATACTTGGGAATTTTGCTTTCATAATGAATCATATTTCGTTTACTGCGCTACACCTGCCCATGTC
AATAGACAAAGTAGACATTTTTCATGTATGATGCTTGCTTTAACCCCTAGATGGGTTTTACAAGAAATTATGAATTCTGA
GAAACGCAGTAGAAAACTAAAAGACTTAATACGCCAACGTCTAGCCGCTTATGACAAAGCTCCTATTCACCCCTCCCTCA
AAGATTATGGTGAAAAAGATAATTATGAATGGCAGCAATATTTTTTACGTGACGATGAAACCATCCCATCCAAGTGTCCA
TTTTCTCGAATTATAAAATACTTTCATAAAAATAAGTAA

Upstream 100 bases:

>100_bases
TTTATTTTTATAGATTAAAAAATAATTATTATAGCCGTGTTAGTCACCTATTCTTAAATAATTAATAGGTTATATATTAT
GACTTAGGAGGGATAAAAAG

Downstream 100 bases:

>100_bases
TTCACTCCGTTTTTTATTATTTAGTTGTACAAACTTTAACCACTGAATAGATTTAATATAGATCAAATTTAGTGGGAGGA
GCATATTATACGTGGGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTILYDKDSLQKNIITLPHWQQEAFGSFQLKMTDKNKPFPCIPAQHGFTANHLRYGFIDDPRDTNTSEDFAALLKEYTEC
SRDTGQYASLIVFIHTPIDLLRETTVEDFEHMYWSLLNTTSRLDEMEWPTHIPNDPMENTWEFCFHNESYFVYCATPAHV
NRQSRHFSCMMLALTPRWVLQEIMNSEKRSRKLKDLIRQRLAAYDKAPIHPSLKDYGEKDNYEWQQYFLRDDETIPSKCP
FSRIIKYFHKNK

Sequences:

>Translated_252_residues
MTILYDKDSLQKNIITLPHWQQEAFGSFQLKMTDKNKPFPCIPAQHGFTANHLRYGFIDDPRDTNTSEDFAALLKEYTEC
SRDTGQYASLIVFIHTPIDLLRETTVEDFEHMYWSLLNTTSRLDEMEWPTHIPNDPMENTWEFCFHNESYFVYCATPAHV
NRQSRHFSCMMLALTPRWVLQEIMNSEKRSRKLKDLIRQRLAAYDKAPIHPSLKDYGEKDNYEWQQYFLRDDETIPSKCP
FSRIIKYFHKNK
>Mature_251_residues
TILYDKDSLQKNIITLPHWQQEAFGSFQLKMTDKNKPFPCIPAQHGFTANHLRYGFIDDPRDTNTSEDFAALLKEYTECS
RDTGQYASLIVFIHTPIDLLRETTVEDFEHMYWSLLNTTSRLDEMEWPTHIPNDPMENTWEFCFHNESYFVYCATPAHVN
RQSRHFSCMMLALTPRWVLQEIMNSEKRSRKLKDLIRQRLAAYDKAPIHPSLKDYGEKDNYEWQQYFLRDDETIPSKCPF
SRIIKYFHKNK

Specific function: Unknown

COG id: COG3403

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014988 [H]

Pfam domain/function: PF08892 YqcI_YcgG [H]

EC number: NA

Molecular weight: Translated: 30051; Mature: 29920

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILYDKDSLQKNIITLPHWQQEAFGSFQLKMTDKNKPFPCIPAQHGFTANHLRYGFIDD
CEEEECCHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCC
PRDTNTSEDFAALLKEYTECSRDTGQYASLIVFIHTPIDLLRETTVEDFEHMYWSLLNTT
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SRLDEMEWPTHIPNDPMENTWEFCFHNESYFVYCATPAHVNRQSRHFSCMMLALTPRWVL
HHHHHCCCCCCCCCCCCHHHHHHEEECCCEEEEECCHHHCCCCCCCCEEEEEHHCHHHHH
QEIMNSEKRSRKLKDLIRQRLAAYDKAPIHPSLKDYGEKDNYEWQQYFLRDDETIPSKCP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCC
FSRIIKYFHKNK
HHHHHHHHHCCC
>Mature Secondary Structure 
TILYDKDSLQKNIITLPHWQQEAFGSFQLKMTDKNKPFPCIPAQHGFTANHLRYGFIDD
EEEECCHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCC
PRDTNTSEDFAALLKEYTECSRDTGQYASLIVFIHTPIDLLRETTVEDFEHMYWSLLNTT
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SRLDEMEWPTHIPNDPMENTWEFCFHNESYFVYCATPAHVNRQSRHFSCMMLALTPRWVL
HHHHHCCCCCCCCCCCCHHHHHHEEECCCEEEEECCHHHCCCCCCCCEEEEEHHCHHHHH
QEIMNSEKRSRKLKDLIRQRLAAYDKAPIHPSLKDYGEKDNYEWQQYFLRDDETIPSKCP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCC
FSRIIKYFHKNK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]