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The map label for this gene is yocH [H]

Identifier: 49185762

GI number: 49185762

Start: 2735965

End: 2737287

Strand: Reverse

Name: yocH [H]

Synonym: BAS2756

Alternate gene names: 49185762

Gene position: 2737287-2735965 (Counterclockwise)

Preceding gene: 49185763

Following gene: 49185760

Centisome position: 52.35

GC content: 38.7

Gene sequence:

>1323_bases
ATGAAAAAAGTAATTGGCGCAGCAACAGCAACTGTTTTCGGATTGGGAGCATTTACTACAACTGCTACTGCAGAAACGAT
CGTAACAGCAGATGTACTCAACGTACGTGAAAAACCGACTACGGAATCAAAAGTGGTCGAAAAAGTAAAAAACGGGGAAG
AGTTAAAAGTCATCAATACCGAAGATGGCTGGTCAAAAATTGAGTTAAATGGTAAAGAAGTATTTGTAAGCTCAGAGTTT
ACTAAAGATATTTACCATGTAACAGCAGATTTGTTAAATGTACGTTCTGAATCAAACACAGAATCAAAAATTCTTGGCAG
ACTGAAAAAAGATGATGTAATTGAATCAACGAACCAAGTAAAAGACGGATGGCTACAATTTGAGTATAAGGGAAAAACAG
CTTATGTAAATGTTTCTTTCTTATCAAGTAAAGCACCAGTTGAAAAAAAGGCTGACGAGAAAACGAAGCAAGTAGCGAAA
GTACAAAAATCGGTTAAAGCTAAGGAAGAAGCTAAAACACAGAAGATAACAAAGGCAAAAGAAACAATAAAACCTAAGGA
AGAAGTGAAAGTCCAAGAAGTAGTAAAACCTAAGGAAGAAGTGAAAGTCCAAGAAGTAGTAAAGCCTAAGGAAGAAGTGA
AAGTCCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTCCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTCCAA
GAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTCCAAGAAGTAGTAAAACCTAAGGAAGAAGTGAAAGTCCAAGAAGTAGC
CAAAGCTAAGGAAGAAGCAAAGGCACAAGAGATAGCGAAGGCTAAGGAAGAAGCAAAAGCGCAAGAAATAGCCAAAGCTA
AGGAAGAAGCAAAAGCACAAGAGATAGCGAAGGCTAAGGAAGAAGCAAAAGCGCAAGAAATAGCCAAAGCTAAGGAAGAG
GCAAAAGCACGAGAAGCACTAAAGGCAAAAGAAGAGTCTAAAAATAACGCGCAGTCTGCTAAACGTGAATTAACGGTGGT
GGCGACAGCATATACTGCTGATCCGAGTGAGAATGGTACATATGGTGGACGCGTTTTAACTGCGATGGGGCATGATTTAA
CGGCTAATCCGAATATGAGAATTATCGCAGTAGATCCGAAAGTAATCCCATTAGGATCTAAAGTATGGGTAGAAGGTTAT
GGAGAAGCGATAGCTGGAGATACCGGAAGTGCAATTAAAGGTAATCGCATTGATGTATTAATGGGTTCAAAAAGTAAAGC
GATGAATTGGGGAAGACAAACTGTTAAAGTGAAGATTTTATAA

Upstream 100 bases:

>100_bases
CGTATTAATATGTTGTTGCAAATGTTTTGGTATAATATTAAATTTTATTATTTTTACGAAAGCATTTGATAGAATTCAAA
AAAATATAATGGAGGTTAAT

Downstream 100 bases:

>100_bases
TCAATCTAGAATATAACATAATGAAAATAAGACTGACATATTCTGTCGGTCTTATTTTCGTACCATAACATCATTAAGAA
TCGCATCAAATATATCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPVEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEE
AKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVWVEGY
GEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Sequences:

>Translated_440_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPVEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEE
AKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVWVEGY
GEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
>Mature_440_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPVEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEE
AKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVWVEGY
GEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 48374; Mature: 48374

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQV
CCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPVEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
CCCEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVVKPKEEVKVQEVAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQ
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEIAKAKEEAKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCC
YGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVL
CCCEEEEECCCCCCCCCCEEEEEECCEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEE
MGSKSKAMNWGRQTVKVKIL
ECCCHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSSEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQV
CCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPVEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
CCCEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVVKPKEEVKVQEVAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQ
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEIAKAKEEAKAREALKAKEESKNNAQSAKRELTVVATAYTADPSENGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCC
YGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVWVEGYGEAIAGDTGSAIKGNRIDVL
CCCEEEEECCCCCCCCCCEEEEEECCEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEE
MGSKSKAMNWGRQTVKVKIL
ECCCHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]