Click here to switch to the map view.

The map label for this gene is 49185622

Identifier: 49185622

GI number: 49185622

Start: 2603041

End: 2603847

Strand: Reverse

Name: 49185622

Synonym: BAS2615

Alternate gene names: NA

Gene position: 2603847-2603041 (Counterclockwise)

Preceding gene: 49185623

Following gene: 49185619

Centisome position: 49.8

GC content: 37.3

Gene sequence:

>807_bases
ATGGGTTATATTGTAGATATTTCGAAATGGAACGGTAACATTAACTGGGATGTAGCAGCTCCTCAATTAGATTTCGTTAT
TGCCAGGGTACAGGATGGATCAAATTATATAGATCCTTTATATAAAAGTTATGTTCAAGCAATGAAAACAAGAAATATTC
CTTTTGGTAACTATGCATTTTGTCGTTTTATTTCAATTGCTGATGCGAAGAAGGAAGCGCAAGATTTCTGGAATCGCGGT
GATAAGAGCGCTACGGTGTGGGTGGCTGATGTCGAAGTGAAAACAATGGATGACATGATAGCCGGTACACAAGCTTTTAT
TGATGAATTACGCCGACTAGGTGCTAAGAAAGTTGGGTTATATGTTGGTCATCATATGTATGGGCCTTTCGGTATGGCGA
ACGTAAAAAGTGACTTTGTATGGATCCCTAGATATGGCGGTAATAAACCAGCATATCCTTGTGATATTTGGCAATACACT
GAGACAGGTAATGTACCAGGTATCGGGAAATGTGATTTAAACCAATTGATAGGAAATAAGCCGCTTTCTTGGTTTACTGA
ATCAGTACCAAAACAAGAAAACATACAAGCACAAGTTTCTAAACAAAATATTATCCAATCTGGAGCTTTTTCACCTTATG
AAACACCAGATGTTATGGGAGCGTTAACTTCTTTAAAAATGACTGCTACCTTCATTTTACAATCGGATGGTTTAACATAT
TTTGTTACTGAACCGACTAGTGATACGCAATTAAACGCACTGAAAAGTTGGCTTGATCGAAAAGGTTGGTGGTATGAAGT
TAAATAA

Upstream 100 bases:

>100_bases
GTATTTACTATACATACTAACAAAGAGTGTTGAATTTTTAGAAGGGCATGAGCAATAAGACGAGCACTGAATATAATAGT
GATAAAGGAGGTGTTAAGTT

Downstream 100 bases:

>100_bases
TAAAAAAATAACTAGCTACCATTTGTACAAAAAAGAGCCGTCCAGTTTTGGAGGGCTCTTTTTTACTATTCAAATAGCTT
ATTCATTAAATCTTGTATTT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; Glycoside Hydrolase Family Protein; Glycosyl Hydrolases Family Protein; Prophage; Phage Lysin; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Lysozyme Domain Protein; U32 Family Peptidase; Peptidase; Lysozyme Domain-Containing Protein; Prophage Lp1 Endolysin; Glycosyl Hydrolases Family; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGYIVDISKWNGNINWDVAAPQLDFVIARVQDGSNYIDPLYKSYVQAMKTRNIPFGNYAFCRFISIADAKKEAQDFWNRG
DKSATVWVADVEVKTMDDMIAGTQAFIDELRRLGAKKVGLYVGHHMYGPFGMANVKSDFVWIPRYGGNKPAYPCDIWQYT
ETGNVPGIGKCDLNQLIGNKPLSWFTESVPKQENIQAQVSKQNIIQSGAFSPYETPDVMGALTSLKMTATFILQSDGLTY
FVTEPTSDTQLNALKSWLDRKGWWYEVK

Sequences:

>Translated_268_residues
MGYIVDISKWNGNINWDVAAPQLDFVIARVQDGSNYIDPLYKSYVQAMKTRNIPFGNYAFCRFISIADAKKEAQDFWNRG
DKSATVWVADVEVKTMDDMIAGTQAFIDELRRLGAKKVGLYVGHHMYGPFGMANVKSDFVWIPRYGGNKPAYPCDIWQYT
ETGNVPGIGKCDLNQLIGNKPLSWFTESVPKQENIQAQVSKQNIIQSGAFSPYETPDVMGALTSLKMTATFILQSDGLTY
FVTEPTSDTQLNALKSWLDRKGWWYEVK
>Mature_267_residues
GYIVDISKWNGNINWDVAAPQLDFVIARVQDGSNYIDPLYKSYVQAMKTRNIPFGNYAFCRFISIADAKKEAQDFWNRGD
KSATVWVADVEVKTMDDMIAGTQAFIDELRRLGAKKVGLYVGHHMYGPFGMANVKSDFVWIPRYGGNKPAYPCDIWQYTE
TGNVPGIGKCDLNQLIGNKPLSWFTESVPKQENIQAQVSKQNIIQSGAFSPYETPDVMGALTSLKMTATFILQSDGLTYF
VTEPTSDTQLNALKSWLDRKGWWYEVK

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 30263; Mature: 30131

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYIVDISKWNGNINWDVAAPQLDFVIARVQDGSNYIDPLYKSYVQAMKTRNIPFGNYAF
CCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
CRFISIADAKKEAQDFWNRGDKSATVWVADVEVKTMDDMIAGTQAFIDELRRLGAKKVGL
HHEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHE
YVGHHMYGPFGMANVKSDFVWIPRYGGNKPAYPCDIWQYTETGNVPGIGKCDLNQLIGNK
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCC
PLSWFTESVPKQENIQAQVSKQNIIQSGAFSPYETPDVMGALTSLKMTATFILQSDGLTY
CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCEE
FVTEPTSDTQLNALKSWLDRKGWWYEVK
EEECCCCCHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
GYIVDISKWNGNINWDVAAPQLDFVIARVQDGSNYIDPLYKSYVQAMKTRNIPFGNYAF
CEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
CRFISIADAKKEAQDFWNRGDKSATVWVADVEVKTMDDMIAGTQAFIDELRRLGAKKVGL
HHEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHE
YVGHHMYGPFGMANVKSDFVWIPRYGGNKPAYPCDIWQYTETGNVPGIGKCDLNQLIGNK
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCC
PLSWFTESVPKQENIQAQVSKQNIIQSGAFSPYETPDVMGALTSLKMTATFILQSDGLTY
CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCEE
FVTEPTSDTQLNALKSWLDRKGWWYEVK
EEECCCCCHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA