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The map label for this gene is yfiS [H]

Identifier: 49185314

GI number: 49185314

Start: 2306108

End: 2307361

Strand: Direct

Name: yfiS [H]

Synonym: BAS2305

Alternate gene names: 49185314

Gene position: 2306108-2307361 (Clockwise)

Preceding gene: 49185313

Following gene: 49185315

Centisome position: 44.11

GC content: 32.62

Gene sequence:

>1254_bases
GTGATTATGATATCTATTAGTATAAAACCTTCGATGCAAGATTTTTATTTAATGGTGAGTGGGCAAATTATTACTATTTT
GGGTTCAACACTTTTACGTTTTGCTCTGTCATTATATGTGCTAGATTTAACAGGGCGTGCTGATATATTCGCAGGATTAT
ATGCGATAACGAGTATTCCGTTTTTGCTAGCTCCTCTTGGCGGAGCGATAGCAGATCGTTTCAATCGCCGTAATTTAATG
GTTATTTTTGATTTCATAAATACTGCGATTGTATTAAGCTTTATAGTTTTGTTATTTACTGGATCTGTATCTATTCTATT
GATTGGAACAATTATGTTTTTACTAGCAATCGTTAATGCAATGTACGCACCAGTTGTAATGGCAAGTATTCCGCAATTAG
TTCCAGAGAAAAAGTTAGAACAAGCGAACGGTATCGTAAATGGTGTGCAAGCATTATCTAATATAGTTGCCCCTGTATTA
GGAGGAATATTGTACGGCATAATTGGTTTGAAAATGCTCGTGATAATCAGTTGTCTTGCTTTCTTTTTATCTGCGATTTT
AGAAATGTTTATTACAATACCTTTTATAAAGAGAGTGCAAGAAAGCCATATCATACCGACAATTGTAAAGGATATGAAAG
GGGGATTTATATATGTTTTAAAACAACCATTTATTTTGAAATCTATGCTTTTAGCCGCATTACTAAATTTAATACTGACG
CCGCTATTTGTTGTTGGTGCTCCAATTATTATACGAGTAACAATGGAAAGTAGCCACACGTTATATGGAATTGGAATGGG
ATTGATTGATTTTGCTACTATTATAGGTGCATTATCAATGGTTTTTTTTGCGAAAAAGCTACAGATGCAAACATTGTATT
ATTGGATGATTTTAATAGCTTTATTAGTAATACCAATGGCACTATCAGTTACACCATTTATTCTTAATTTAGGATACTAT
CCACCATTTATCCTCTTTATACTTTCTTCTATTTTAATTGCAATGATTATGACAGTTGTATCCATCTATGTGATTACTGT
AGTCCAAAAGAAAACACCAAATGAAAACTTAGGAAAAGTAATGGCAATTATAACAGCAGTATCCCAATGTATGGCACCGA
TTGGGCAAGTCATATATGGTTTTATGTTTGAAAAATTCAGCATGAAGATTTATTTACCGATATTAGCTATTAGTTTCATA
ATGATATTATTAGCGGTTGTGACGAAGAAAATATTATCGAATGAAGGGAACTAG

Upstream 100 bases:

>100_bases
GATCTTTTAATTATATGCTGGAGGTTTTAATGAAACAGAGGTGATATTTTTTCTGTTTGTGTATTATAGACCGACAGTCG
GTCTAAATTAAAGGAAGGGT

Downstream 100 bases:

>100_bases
CTTTATATGATTAGGAGAATGTTAAAAAGAGATTTCTCTCAAAATAAAATGATAATTACCATATTGTTTATGTTTATCAT
GTTATCAAGTCTTTTAATGG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MIMISISIKPSMQDFYLMVSGQIITILGSTLLRFALSLYVLDLTGRADIFAGLYAITSIPFLLAPLGGAIADRFNRRNLM
VIFDFINTAIVLSFIVLLFTGSVSILLIGTIMFLLAIVNAMYAPVVMASIPQLVPEKKLEQANGIVNGVQALSNIVAPVL
GGILYGIIGLKMLVIISCLAFFLSAILEMFITIPFIKRVQESHIIPTIVKDMKGGFIYVLKQPFILKSMLLAALLNLILT
PLFVVGAPIIIRVTMESSHTLYGIGMGLIDFATIIGALSMVFFAKKLQMQTLYYWMILIALLVIPMALSVTPFILNLGYY
PPFILFILSSILIAMIMTVVSIYVITVVQKKTPNENLGKVMAIITAVSQCMAPIGQVIYGFMFEKFSMKIYLPILAISFI
MILLAVVTKKILSNEGN

Sequences:

>Translated_417_residues
MIMISISIKPSMQDFYLMVSGQIITILGSTLLRFALSLYVLDLTGRADIFAGLYAITSIPFLLAPLGGAIADRFNRRNLM
VIFDFINTAIVLSFIVLLFTGSVSILLIGTIMFLLAIVNAMYAPVVMASIPQLVPEKKLEQANGIVNGVQALSNIVAPVL
GGILYGIIGLKMLVIISCLAFFLSAILEMFITIPFIKRVQESHIIPTIVKDMKGGFIYVLKQPFILKSMLLAALLNLILT
PLFVVGAPIIIRVTMESSHTLYGIGMGLIDFATIIGALSMVFFAKKLQMQTLYYWMILIALLVIPMALSVTPFILNLGYY
PPFILFILSSILIAMIMTVVSIYVITVVQKKTPNENLGKVMAIITAVSQCMAPIGQVIYGFMFEKFSMKIYLPILAISFI
MILLAVVTKKILSNEGN
>Mature_417_residues
MIMISISIKPSMQDFYLMVSGQIITILGSTLLRFALSLYVLDLTGRADIFAGLYAITSIPFLLAPLGGAIADRFNRRNLM
VIFDFINTAIVLSFIVLLFTGSVSILLIGTIMFLLAIVNAMYAPVVMASIPQLVPEKKLEQANGIVNGVQALSNIVAPVL
GGILYGIIGLKMLVIISCLAFFLSAILEMFITIPFIKRVQESHIIPTIVKDMKGGFIYVLKQPFILKSMLLAALLNLILT
PLFVVGAPIIIRVTMESSHTLYGIGMGLIDFATIIGALSMVFFAKKLQMQTLYYWMILIALLVIPMALSVTPFILNLGYY
PPFILFILSSILIAMIMTVVSIYVITVVQKKTPNENLGKVMAIITAVSQCMAPIGQVIYGFMFEKFSMKIYLPILAISFI
MILLAVVTKKILSNEGN

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45791; Mature: 45791

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMISISIKPSMQDFYLMVSGQIITILGSTLLRFALSLYVLDLTGRADIFAGLYAITSIP
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLLAPLGGAIADRFNRRNLMVIFDFINTAIVLSFIVLLFTGSVSILLIGTIMFLLAIVNA
HHHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MYAPVVMASIPQLVPEKKLEQANGIVNGVQALSNIVAPVLGGILYGIIGLKMLVIISCLA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLSAILEMFITIPFIKRVQESHIIPTIVKDMKGGFIYVLKQPFILKSMLLAALLNLILT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
PLFVVGAPIIIRVTMESSHTLYGIGMGLIDFATIIGALSMVFFAKKLQMQTLYYWMILIA
HHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVIPMALSVTPFILNLGYYPPFILFILSSILIAMIMTVVSIYVITVVQKKTPNENLGKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MAIITAVSQCMAPIGQVIYGFMFEKFSMKIYLPILAISFIMILLAVVTKKILSNEGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIMISISIKPSMQDFYLMVSGQIITILGSTLLRFALSLYVLDLTGRADIFAGLYAITSIP
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLLAPLGGAIADRFNRRNLMVIFDFINTAIVLSFIVLLFTGSVSILLIGTIMFLLAIVNA
HHHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
MYAPVVMASIPQLVPEKKLEQANGIVNGVQALSNIVAPVLGGILYGIIGLKMLVIISCLA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLSAILEMFITIPFIKRVQESHIIPTIVKDMKGGFIYVLKQPFILKSMLLAALLNLILT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
PLFVVGAPIIIRVTMESSHTLYGIGMGLIDFATIIGALSMVFFAKKLQMQTLYYWMILIA
HHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVIPMALSVTPFILNLGYYPPFILFILSSILIAMIMTVVSIYVITVVQKKTPNENLGKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MAIITAVSQCMAPIGQVIYGFMFEKFSMKIYLPILAISFIMILLAVVTKKILSNEGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]