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The map label for this gene is yodM [H]

Identifier: 49185163

GI number: 49185163

Start: 2152927

End: 2153568

Strand: Direct

Name: yodM [H]

Synonym: BAS2154

Alternate gene names: 49185163

Gene position: 2152927-2153568 (Clockwise)

Preceding gene: 49185162

Following gene: 49185170

Centisome position: 41.18

GC content: 32.87

Gene sequence:

>642_bases
ATGTATGTGAAACGATATCGACATTTATACTTGTTAAGTTTTACGCTACTCATTTGTTTTGTCGTATTATCACTTTCGTA
TCATACCGCTTGTATTGAGAAATTTGACAATATAGTCGCGCATTTTATTCAAAGTTTTCGAAACGACTACTTGACAACCT
ATTTTACTTGGATGTCTTTTATCGGTTCCAAAAGAATATATTTTCCATTACTCATCATTCTTGTAATGTATTTTCTCGTT
AGAAAAAAATTGCTTAGTGCATTACTTCTAACAATTAATTATTATGGATCTCGTTATTTAAACAGTATGCTTAAACTATG
GTACGAACGAGCAAGACCTGATGTAACACAACTTGTTACTGCAACTGGATATAGTTTTCCGAGCGGTCATACGATGAATG
CTACTGCTTTTTTAGGATTTATTGCATACGTCACAATTACAGAAGAACGTATTACATTGCATAAAAAATTGTTGATTATT
TTTATAGCGAGCTTTGTTGTATTATCTATTTCAGTTAGCCGAATATATCTTGGCGTTCACTATCCATCTGACATATTAGC
AGGATGGGCAGCGGGCGGTAGCTGGCTCGTTTTATGTGTTATATTTCATAAAACGTTCATTAAAAAAGAACCTATGTCAT
AA

Upstream 100 bases:

>100_bases
AAGAAACAATTAACAATTATATTTTTTAATAAACTATGCATAAAAAAGAAATGGAGAGGAAAACTAAAACAACCGCTCCA
TTTTTTTGCATAGTGAGGTT

Downstream 100 bases:

>100_bases
TAGGTTCTTTTTCCATTGGTTCAACATGAATGTGTGCATGATAAATGCCAAACTTTTTCCGAAGCATAGCCTCAATGTTG
TCAGTAATACAATGACTTTC

Product: PAP2 family protein

Products: phosphatidylglycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYVKRYRHLYLLSFTLLICFVVLSLSYHTACIEKFDNIVAHFIQSFRNDYLTTYFTWMSFIGSKRIYFPLLIILVMYFLV
RKKLLSALLLTINYYGSRYLNSMLKLWYERARPDVTQLVTATGYSFPSGHTMNATAFLGFIAYVTITEERITLHKKLLII
FIASFVVLSISVSRIYLGVHYPSDILAGWAAGGSWLVLCVIFHKTFIKKEPMS

Sequences:

>Translated_213_residues
MYVKRYRHLYLLSFTLLICFVVLSLSYHTACIEKFDNIVAHFIQSFRNDYLTTYFTWMSFIGSKRIYFPLLIILVMYFLV
RKKLLSALLLTINYYGSRYLNSMLKLWYERARPDVTQLVTATGYSFPSGHTMNATAFLGFIAYVTITEERITLHKKLLII
FIASFVVLSISVSRIYLGVHYPSDILAGWAAGGSWLVLCVIFHKTFIKKEPMS
>Mature_213_residues
MYVKRYRHLYLLSFTLLICFVVLSLSYHTACIEKFDNIVAHFIQSFRNDYLTTYFTWMSFIGSKRIYFPLLIILVMYFLV
RKKLLSALLLTINYYGSRYLNSMLKLWYERARPDVTQLVTATGYSFPSGHTMNATAFLGFIAYVTITEERITLHKKLLII
FIASFVVLSISVSRIYLGVHYPSDILAGWAAGGSWLVLCVIFHKTFIKKEPMS

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: 3.1.3.27

Molecular weight: Translated: 24771; Mature: 24771

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVKRYRHLYLLSFTLLICFVVLSLSYHTACIEKFDNIVAHFIQSFRNDYLTTYFTWMSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSKRIYFPLLIILVMYFLVRKKLLSALLLTINYYGSRYLNSMLKLWYERARPDVTQLVT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ATGYSFPSGHTMNATAFLGFIAYVTITEERITLHKKLLIIFIASFVVLSISVSRIYLGVH
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YPSDILAGWAAGGSWLVLCVIFHKTFIKKEPMS
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYVKRYRHLYLLSFTLLICFVVLSLSYHTACIEKFDNIVAHFIQSFRNDYLTTYFTWMSF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSKRIYFPLLIILVMYFLVRKKLLSALLLTINYYGSRYLNSMLKLWYERARPDVTQLVT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ATGYSFPSGHTMNATAFLGFIAYVTITEERITLHKKLLIIFIASFVVLSISVSRIYLGVH
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
YPSDILAGWAAGGSWLVLCVIFHKTFIKKEPMS
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: phosphatidylglycerophosphate; H2O

Specific reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]