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The map label for this gene is fliN [C]

Identifier: 49184602

GI number: 49184602

Start: 1610151

End: 1610510

Strand: Direct

Name: fliN [C]

Synonym: BAS1587

Alternate gene names: 49184602

Gene position: 1610151-1610510 (Clockwise)

Preceding gene: 49184601

Following gene: 49184603

Centisome position: 30.79

GC content: 37.22

Gene sequence:

>360_bases
ATGAAACATGAAGTATCTCCTGTGTCATTAATGGAATTAGAAGATTTTGCAGGAAAGCGAAACGAAGCAAGTAAAGCACA
TATTGATACTGTTTCAGATATTTCGATTGAACTTGGTGTAAAGCTTGGAAAGGCATCTATTACGCTTGGTGACGTGAAGC
AATTAAAAGTTGGCGATGTTCTGGAAGTAGAGAAAAACTTAGGACATAAAGTAGATGTATATTTAAGTAATATGAAAGTC
GGCATCGGGGAAGCGATCGTAATGGACGAGAAGTTCGGTATTATTATTTCTGAAATTGAAGCTGACAAGAAGCAAGCTGC
GCTTATGAAAGCGCAAAGTCAAATGCAAGATAAAGAGTAG

Upstream 100 bases:

>100_bases
GGTTATGTAGATGGAAAGCATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCGCTCTTATTTAAAAGTTT
TGTAGAGTAGGAGGATCCGT

Downstream 100 bases:

>100_bases
AGGAGGAGTCATATGTCGTATATGACGACCTTATTTCAAGTCGTTTTACTGTTTGGTGCGCTCGGCTACGGTGCCTATTA
TATGACGAAAAAGACGCGCA

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Motor Switch Protein FliN; Flagellar Motor Switch Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHEVSPVSLMELEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Sequences:

>Translated_119_residues
MKHEVSPVSLMELEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
>Mature_119_residues
MKHEVSPVSLMELEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13010; Mature: 13010

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEVSPVSLMELEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHEVSPVSLMELEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKQLKVGDV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECEEECCEEEEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA