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The map label for this gene is ytxD [H]

Identifier: 49184554

GI number: 49184554

Start: 1566929

End: 1567693

Strand: Direct

Name: ytxD [H]

Synonym: BAS1539

Alternate gene names: 49184554

Gene position: 1566929-1567693 (Clockwise)

Preceding gene: 49184552

Following gene: 49184555

Centisome position: 29.97

GC content: 34.64

Gene sequence:

>765_bases
GTGGGCATAATAGTAGGTTTTGCTATTGTAATAGCGGCAATTATGCTTGGCGGAGGCGGAATAAAAGCTTTTAAAAACTT
TTTAGATGTTTCATCTATTTTAATTGTCATAGGGGGAACAACAGCAACAATTGTTGTGGCATATCGATTTGGAGAAATAA
AAAAATATACGAAAAGTATTTTTACTGTTTTACATAGAAGAGAAGAAGATTTAGAACAGTTAACGGATTTGTTTGTTGAT
TTTTCGAAAAAGTCTAAAAAACACGGCCTACTTTCTTTAGAAGTTGATGGAGAGCAAGTAGACAACCCTTTTATTCAAAA
AGGAATTCGGTTAATGTTAAGTGGTTACGATGAAGAGGAATTAAAAGAAGTGTTAATGAAAGATGTTGAAACGGAAGTGT
ATGAGTTAAGAAAAGGAGCGGCGTTATTAGATAAAATTGGTGATTTCGCTCCTGCTTGGGGTATGATAGGGACTTTAATT
GGTCTTATCATTATGCTTCAAAACTTGCAAGACACATCGCAAATTGGCACCGGGATGGCAGTTGCAATGTTAACGACATT
GTATGGATCCGTACTTGCAAATATGATTGCAATCCCACTTGCTGAAAAAGTGTATAGAGGGATTGAGGATTTATATACAG
AGAAGAAGTTTGTTATTGAAGCAATTTCAGAATTGTATCGTGGACAAATTCCGTCTAAATTAAAGTTGAAACTGGATACG
TATGTATACGAAACAAAGATAAAAAAAGTAAAACGAGCAGCCTAA

Upstream 100 bases:

>100_bases
TTTTATAAAAATGAAAAGGAAAGGGCAGGAATATGGGAGACGAAAATCAAGGATTTGCTAGACCAGAAAGAAAAAAAGGA
AGTTTGATATTTCTAGCCCA

Downstream 100 bases:

>100_bases
TATTGCAAGGAGTGGTATGGTGATGATAAAACGACCGCAAAAGGGATCGCCTCGTTGGATGACGACTTTTACAGATTTAA
CGATGTTATTATTAACTTTC

Product: flagellar motor protein MotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVD
FSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLI
GLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDT
YVYETKIKKVKRAA

Sequences:

>Translated_254_residues
MGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVD
FSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLI
GLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDT
YVYETKIKKVKRAA
>Mature_253_residues
GIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVDF
SKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIG
LIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDTY
VYETKIKKVKRAA

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 28180; Mature: 28049

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSI
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHH
FTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHH
LKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQIGTGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
VAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVYETKIKKVKRAA
HHHHHHHHHHHHCC
>Mature Secondary Structure 
GIIVGFAIVIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSI
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHH
FTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCHHHHHHHHHHHCCCCHHH
LKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQDTSQIGTGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHH
VAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVYETKIKKVKRAA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]