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The map label for this gene is ypeP [H]

Identifier: 49184525

GI number: 49184525

Start: 1543156

End: 1543815

Strand: Direct

Name: ypeP [H]

Synonym: BAS1510

Alternate gene names: 49184525

Gene position: 1543156-1543815 (Clockwise)

Preceding gene: 49184524

Following gene: 49184528

Centisome position: 29.51

GC content: 34.7

Gene sequence:

>660_bases
ATGAAATATAAAATTCATTGGTTGTATAAAACAAAGCGCGGTTTGCAGACGGAATTAATGACAGATTATATGAACATAGA
AGAAGCACTTCAATTTGCGGAGGATTTCGAGAAAACAGGAAGAGTGAAGGAATTATTATTTTACGATGAAATGGATACAG
AATGGTTATTAAAGGAAATGAAAAAGCTGAGTAAACAAGTGGAGGAAGAACCCCAAGAAATACTCGTTTATTTTGATGGT
GGTTATGATGTACAGACGAAAGAAGCTGGGGTAGGTATATGTGTATACTATAAAAAAGGAAATGCAAAATACCGAATTCG
CCGTAATGCATATATAGAAGGCATATATGATAATAATGAAGCGGAATACGCATCATTACTATATAGCATGAATATACTCG
AGGAATTAGGGATTAAGTATGAAGCAGTTACACTTCGCGGGGACTCTCAAGTTGTACTGCAACAATTGGCCGGAGAATGG
CCTTGTTATGATGAACATTTAAATCATTATTTAGACCAAATTGAGCAAAAAGCGAAGCAAATGAAATTAAAACTTGTATG
TGAGCCAATCTCTAGAAAACAAAATAAAGAAGCACAACAATTGGCAACGCAAGCATTAGAAGGAACAGTCATTGATAGTC
ATAAAGAAATAACCGAATAG

Upstream 100 bases:

>100_bases
GTGATTATATTGAATATAATTCTGTGACTCTTGATAAAATATAATAAAATAAAGTGAGGCTTTCATTAGCTGAAGAAGTC
TTACATAAGGGGAATCTAGT

Downstream 100 bases:

>100_bases
AGAGGTGCAACGGTGGATAAAAAGCAACTCATTACAGAGGTAAATGACTTATTAGAAACGTATTGTGAAGGATGTTTTTT
GCGAGAACATAATCGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAQQLATQALEGTVIDSHKEITE

Sequences:

>Translated_219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAQQLATQALEGTVIDSHKEITE
>Mature_219_residues
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEMKKLSKQVEEEPQEILVYFDG
GYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNEAEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEW
PCYDEHLNHYLDQIEQKAKQMKLKLVCEPISRKQNKEAQQLATQALEGTVIDSHKEITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: 3.1.26.4

Molecular weight: Translated: 25780; Mature: 25780

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEM
CCEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAQQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure
MKYKIHWLYKTKRGLQTELMTDYMNIEEALQFAEDFEKTGRVKELLFYDEMDTEWLLKEM
CCEEEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
KKLSKQVEEEPQEILVYFDGGYDVQTKEAGVGICVYYKKGNAKYRIRRNAYIEGIYDNNE
HHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEEECCCH
AEYASLLYSMNILEELGIKYEAVTLRGDSQVVLQQLAGEWPCYDEHLNHYLDQIEQKAKQ
HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MKLKLVCEPISRKQNKEAQQLATQALEGTVIDSHKEITE
HHHHHEECHHHHCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]