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The map label for this gene is 49184150

Identifier: 49184150

GI number: 49184150

Start: 1182412

End: 1183614

Strand: Reverse

Name: 49184150

Synonym: BAS1130

Alternate gene names: NA

Gene position: 1183614-1182412 (Counterclockwise)

Preceding gene: 49184161

Following gene: 49184149

Centisome position: 22.64

GC content: 51.21

Gene sequence:

>1203_bases
ATGTCAAATAATAATTATTCAAATGGATTAAACCCCGATGAATCTTTATCAGCTAGTGCATTTGACCCTAATCTTGTAGG
ACCTACATTACCACCGATACCACCATTTACCCTTCCTACCGGACCAACTGGGCCGACTGGACCGACTGGGCCGACTGGGC
CAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGA
GACACTGGTACTACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGG
ACCAACTGGGCCAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTG
GGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAACTGGACCAACTGGACCAACTGGGCCAACTGGAGACACT
GGTACTACTGGACCAACTGGGCCAACTGGACCAACTGGACCAACTGGGCCGACTGGACCGACTGGGCCGACTGGGCCAAC
TGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAA
CTGGACCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAACTGGACCAACTGGACCA
ACTGGGCCAACTGGACCAACTGGGCCAACTGGTGCTACCGGACTGACTGGACCGACTGGACCGACTGGGCCATCCGGACT
AGGACTTCCAGCAGGACTATATGCATTTAACTCCGGTGGGATTTCTTTAGATTTAGGAATTAATGATCCAGTACCATTTA
ATACTGTTGGATCTCAGTTTGGTACAGCAATTTCTCAATTAGATGCTGATACTTTCGTAATTAGTGAAACTGGATTCTAT
AAAATTACTGTTATCGCTAATACTGCAACAGCAAGTGTATTAGGAGGTCTTACAATCCAAGTGAATGGAGTACCTGTACC
AGGTACTGGATCAAGTTTGATTTCACTCGGAGCACCTATCGTTATTCAAGCAATTACGCAAATTACGACAACTCCATCAT
TAGTTGAAGTAATTGTTACAGGGCTTGGACTATCACTAGCTCTTGGCACGAGTGCATCCATTATTATTGAAAAAGTTGCT
TAA

Upstream 100 bases:

>100_bases
TCAAGTAGTTTAAGATTTCTTTTCAATAATTCAAATGTCCGTGTCATTTTCTTTCGGTTTTGCATCTACTATATAATGAA
CGCTTTATGGAGGTGAATTT

Downstream 100 bases:

>100_bases
TTTTTTACTTAGCAGTAAAACTGATATCAGTTTTACTGCTTTTTCATTTTTAAATTCAATCATTAAATCTTCCTTTTCTA
CATAGTCATAATGTTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTG
DTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDT
GTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGP
TGPTGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFY
KITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA

Sequences:

>Translated_400_residues
MSNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTG
DTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDT
GTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGP
TGPTGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFY
KITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA
>Mature_399_residues
SNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGD
TGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTG
TTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPT
GPTGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYK
ITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56847616, Length=275, Percent_Identity=34.1818181818182, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI65301115, Length=275, Percent_Identity=34.1818181818182, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI115392133, Length=237, Percent_Identity=40.5063291139241, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI111118976, Length=237, Percent_Identity=45.9915611814346, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI48762934, Length=266, Percent_Identity=39.0977443609023, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI111118974, Length=237, Percent_Identity=45.9915611814346, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI89363017, Length=249, Percent_Identity=41.3654618473896, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI122937273, Length=345, Percent_Identity=31.0144927536232, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI5803080, Length=243, Percent_Identity=39.5061728395062, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI111118970, Length=204, Percent_Identity=44.1176470588235, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI111118972, Length=202, Percent_Identity=44.0594059405941, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI111118968, Length=204, Percent_Identity=44.1176470588235, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI11386161, Length=245, Percent_Identity=41.6326530612245, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4502961, Length=235, Percent_Identity=38.2978723404255, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI98985810, Length=190, Percent_Identity=44.2105263157895, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI32140760, Length=218, Percent_Identity=41.2844036697248, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI98985806, Length=190, Percent_Identity=44.2105263157895, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI299523253, Length=190, Percent_Identity=44.2105263157895, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI299523257, Length=190, Percent_Identity=44.2105263157895, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI110735435, Length=300, Percent_Identity=34.3333333333333, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI115527070, Length=253, Percent_Identity=35.1778656126482, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI115527062, Length=248, Percent_Identity=35.4838709677419, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI183583553, Length=245, Percent_Identity=35.1020408163265, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI115527066, Length=253, Percent_Identity=35.1778656126482, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI156616290, Length=278, Percent_Identity=32.0143884892086, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI73486666, Length=226, Percent_Identity=36.7256637168142, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI40805823, Length=230, Percent_Identity=36.0869565217391, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI119508426, Length=221, Percent_Identity=40.2714932126697, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI55743098, Length=285, Percent_Identity=35.0877192982456, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI61699226, Length=172, Percent_Identity=44.1860465116279, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI55743106, Length=285, Percent_Identity=35.0877192982456, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI240255535, Length=285, Percent_Identity=35.0877192982456, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI18780273, Length=201, Percent_Identity=35.8208955223881, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI38570075, Length=301, Percent_Identity=33.5548172757475, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI154759255, Length=255, Percent_Identity=37.2549019607843, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193203538, Length=250, Percent_Identity=43.2, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71992048, Length=233, Percent_Identity=37.3390557939914, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17539078, Length=177, Percent_Identity=40.6779661016949, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17535735, Length=142, Percent_Identity=43.6619718309859, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17569903, Length=185, Percent_Identity=37.8378378378378, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI17137252, Length=236, Percent_Identity=38.135593220339, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24581820, Length=271, Percent_Identity=35.4243542435424, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581822, Length=271, Percent_Identity=35.4243542435424, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581824, Length=271, Percent_Identity=35.4243542435424, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24642197, Length=233, Percent_Identity=23.175965665236, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36837; Mature: 36705

Theoretical pI: Translated: 3.25; Mature: 3.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEEEEECC
>Mature Secondary Structure 
SNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHH
GTAISQLDADTFVISETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPI
HHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHCCEEEEECCEECCCCCHHHHHHCCHH
VIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA
HHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA