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The map label for this gene is gerPC [H]

Identifier: 49184086

GI number: 49184086

Start: 1120467

End: 1121081

Strand: Reverse

Name: gerPC [H]

Synonym: BAS1066

Alternate gene names: 49184086

Gene position: 1121081-1120467 (Counterclockwise)

Preceding gene: 49184087

Following gene: 49184085

Centisome position: 21.44

GC content: 33.82

Gene sequence:

>615_bases
ATGAATCAAGATATATATACTTACTTACACCAACTTCAACAAGCTCTTCAAGTACAACAAGCAACCATTCTTAACTTAGA
AGATCAAGTTCGTCAATTACAAGAAGAGCTTAATGAATTAAAAAATCGCCCCTCCTCTTCTATAGGAAAAGTGGAATACA
AATTCGATCAATTAAAAGTAGAAAATTTAAATGGCACTTTAAATATTGGATTAAATCCATTTTCAACAAAAGAGCAACAA
ATTGAGGATTTTCAAGTTGATACAGAAACTTTGAAGGTCAATCCTGAAACTGACACAAATCCAGACTTTTACCAAGGAAT
TCTTCAAGAAATGCACCGTTACTTAGATGAAGAAGCATATAATCGAATTCTCCATTTTGAAAAAGAAGAGAGAACGCCAC
TCGATGAAATGTATCGACAAATGATGGTTGATGACATAAAAAAACAGATGGAGCATCGACTTCCTTATTACTTATCACAA
GCACAATCATATGAAGGGACTTCGACAGATCCAGATTATTTACGAGATATCATTATCCAAGCTATGAAACATGATATCGA
CAAAGCCTTCCTCTCTTTTATTCAACACATACCGGGCAATTTCCGAAAGGAGTAA

Upstream 100 bases:

>100_bases
TATTTCTATCAAACCATCAACTAGTTCTTCTTAAGACATCCTTGTCATAAATATATAGAGGAATATATTTACCCTCCCTA
TTGAAAAGGAGGTTTCACAA

Downstream 100 bases:

>100_bases
GTATGTATGAACCTTAACGTTGTAAATCGCGAGTTCAAAGTCGGACAGATTAAAATGAACGGTGTATCATCGTCCGCACT
CTTTTTAATTGGGGATGCAA

Product: spore germination protein GerPC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNQDIYTYLHQLQQALQVQQATILNLEDQVRQLQEELNELKNRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQQ
IEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEKEERTPLDEMYRQMMVDDIKKQMEHRLPYYLSQ
AQSYEGTSTDPDYLRDIIIQAMKHDIDKAFLSFIQHIPGNFRKE

Sequences:

>Translated_204_residues
MNQDIYTYLHQLQQALQVQQATILNLEDQVRQLQEELNELKNRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQQ
IEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEKEERTPLDEMYRQMMVDDIKKQMEHRLPYYLSQ
AQSYEGTSTDPDYLRDIIIQAMKHDIDKAFLSFIQHIPGNFRKE
>Mature_204_residues
MNQDIYTYLHQLQQALQVQQATILNLEDQVRQLQEELNELKNRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFSTKEQQ
IEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAYNRILHFEKEERTPLDEMYRQMMVDDIKKQMEHRLPYYLSQ
AQSYEGTSTDPDYLRDIIIQAMKHDIDKAFLSFIQHIPGNFRKE

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019673 [H]

Pfam domain/function: PF10737 GerPC [H]

EC number: NA

Molecular weight: Translated: 24297; Mature: 24297

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQDIYTYLHQLQQALQVQQATILNLEDQVRQLQEELNELKNRPSSSIGKVEYKFDQLKV
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEE
ENLNGTLNIGLNPFSTKEQQIEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAY
ECCCCEEEECCCCCCCHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
NRILHFEKEERTPLDEMYRQMMVDDIKKQMEHRLPYYLSQAQSYEGTSTDPDYLRDIIIQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHH
AMKHDIDKAFLSFIQHIPGNFRKE
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQDIYTYLHQLQQALQVQQATILNLEDQVRQLQEELNELKNRPSSSIGKVEYKFDQLKV
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEE
ENLNGTLNIGLNPFSTKEQQIEDFQVDTETLKVNPETDTNPDFYQGILQEMHRYLDEEAY
ECCCCEEEECCCCCCCHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
NRILHFEKEERTPLDEMYRQMMVDDIKKQMEHRLPYYLSQAQSYEGTSTDPDYLRDIIIQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHH
AMKHDIDKAFLSFIQHIPGNFRKE
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10715007 [H]