Click here to switch to the map view.

The map label for this gene is gerPE [H]

Identifier: 49184084

GI number: 49184084

Start: 1119864

End: 1120250

Strand: Reverse

Name: gerPE [H]

Synonym: BAS1064

Alternate gene names: 49184084

Gene position: 1120250-1119864 (Counterclockwise)

Preceding gene: 49184085

Following gene: 49184083

Centisome position: 21.43

GC content: 34.88

Gene sequence:

>387_bases
ATGTTACATCATGTGTCTGTTGTCCAAAATGTTTCTATTATTTCTTTAGGGATTACTGCCGTGTTTCAAGTTGGAGATGC
CAATCAAATGGAATTAAAAAGTAGGGCCCTTGCCGTCCACAGGGAAATCCCTTGTTATATAAAAGACGAAGGTCGCTTAG
ACGCATTTGAAATCTTTACAGATGAATACATTACAATCCCGAAACGAACGACAGATGTAAAATTAAACATTGTAAATGAA
TGTCCTTTTATTGAAGTGAATAACGTTGAATTACGAACACTTTTAAATTCCGGTTGCTTTCAAATTGGAAATGTGGATTA
TGTTTTTAATAACTCTCGTATTATGCAAATCCGCCAATATATCACGGATGAACCTTCCGTTCAATAA

Upstream 100 bases:

>100_bases
TTCTATTCTTGATACACCATTCGAAACTGTTACAGAGGGGCCATTTGTACCATTAGTAACAGATGTCCCTCCTACTCCAG
GTTAAGGAGACTGATAGATT

Downstream 100 bases:

>100_bases
TTCATATAGTAATTAAAAAGCTTAGTAAAGTAGGTGGATGATATGCCTTCTGTTGTTGGAAATCTCGTCGTTCAAAACAG
TAATGGCTCTTTCAATTTAG

Product: spore germination protein GerPE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLHHVSVVQNVSIISLGITAVFQVGDANQMELKSRALAVHREIPCYIKDEGRLDAFEIFTDEYITIPKRTTDVKLNIVNE
CPFIEVNNVELRTLLNSGCFQIGNVDYVFNNSRIMQIRQYITDEPSVQ

Sequences:

>Translated_128_residues
MLHHVSVVQNVSIISLGITAVFQVGDANQMELKSRALAVHREIPCYIKDEGRLDAFEIFTDEYITIPKRTTDVKLNIVNE
CPFIEVNNVELRTLLNSGCFQIGNVDYVFNNSRIMQIRQYITDEPSVQ
>Mature_128_residues
MLHHVSVVQNVSIISLGITAVFQVGDANQMELKSRALAVHREIPCYIKDEGRLDAFEIFTDEYITIPKRTTDVKLNIVNE
CPFIEVNNVELRTLLNSGCFQIGNVDYVFNNSRIMQIRQYITDEPSVQ

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14617; Mature: 14617

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHHVSVVQNVSIISLGITAVFQVGDANQMELKSRALAVHREIPCYIKDEGRLDAFEIFT
CCCCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHEEECCCCEEECCCCCEEEEEEEC
DEYITIPKRTTDVKLNIVNECPFIEVNNVELRTLLNSGCFQIGNVDYVFNNSRIMQIRQY
CCEEECCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEECCEEEEECCCHHEEHHHH
ITDEPSVQ
HCCCCCCC
>Mature Secondary Structure
MLHHVSVVQNVSIISLGITAVFQVGDANQMELKSRALAVHREIPCYIKDEGRLDAFEIFT
CCCCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHEEECCCCEEECCCCCEEEEEEEC
DEYITIPKRTTDVKLNIVNECPFIEVNNVELRTLLNSGCFQIGNVDYVFNNSRIMQIRQY
CCEEECCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEECCEEEEECCCHHEEHHHH
ITDEPSVQ
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10715007 [H]