Click here to switch to the map view.

The map label for this gene is wapA [H]

Identifier: 49184046

GI number: 49184046

Start: 1082825

End: 1083577

Strand: Direct

Name: wapA [H]

Synonym: BAS1025

Alternate gene names: 49184046

Gene position: 1082825-1083577 (Clockwise)

Preceding gene: 49184045

Following gene: 49184047

Centisome position: 20.71

GC content: 38.51

Gene sequence:

>753_bases
ATGTATAAATGGATTTTGGGTAGTGGAATCAGAAGGACAAACGATTATCACTGCAACCTTCGCGGTGACGTCGTTACGAT
AACGAATCAGGATAAAGAAGTTGTAGCAACGTATGAATATGATGCATGGGGTAATGTAGTAAAGAGTGATACGAAAGGTA
TCGCAGTAGATAATCCATTTGGATATGCGGGATACATGTATGATAAAGAGATTGGTATGTATTATTTGATTGCCCGTTAC
TATAATCCAGAACATGGTGTGTTCTTATCAGTGGATCCTGATCCGGGTGATGAAGATGATCCGGTTACAATGAATGGGTA
TACGTATGGTGATAATAATCCAGTGATGATGATTAATCCAGATGGTCATTTAGCGTGGTTTATTCCAGTCGCTGTACACG
AGGCGAGAATCGCTGCTCCGCATGTAGGTCGTTTTGTTGGTAAACAATTGGCTAAACGTGCTATAACGCAACCATTAAAG
TACAAGAATACGAAAGCAGTAGCAGGTAAAATTATTGGATATACAAAACATGGGTTCAACCAAGCGATTAGTCGTAATAA
CGGATTAGGGGTGTCACCAAAGGCCATCTTACATACAGTTAAGTCAGGTAAGATGGTTATACAAAAAGATCGTGGAACTA
TTAAATATACTAGTAAACAAGCTGTAGTTGTTTTAAATAAGAGGGGAAAAATCGTAACGACTTTTGCTAGAGGAACGAAA
TATACACGGAAAGGAAAAAATAAGCGTGAGTAA

Upstream 100 bases:

>100_bases
CATTTGTCTAAGAATGAGTTTGTTTATGATAATATGCTAAATTAGACTGGATAAAGAAATATTTGTGGAAAGAAGGGCTA
TTATCTGCTCTTCTTTCTTT

Downstream 100 bases:

>100_bases
ATTTAATAGTGATGTGCAAGGAGTATTGCAAGGAATATTAAAGGAAAAGCAGCCTGAGCTATTGTGGATTGTAAATTGTA
GGGACTTTAGTATATTAGAA

Product: wall-associated domain-containing protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP200; CWBP200 [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MYKWILGSGIRRTNDYHCNLRGDVVTITNQDKEVVATYEYDAWGNVVKSDTKGIAVDNPFGYAGYMYDKEIGMYYLIARY
YNPEHGVFLSVDPDPGDEDDPVTMNGYTYGDNNPVMMINPDGHLAWFIPVAVHEARIAAPHVGRFVGKQLAKRAITQPLK
YKNTKAVAGKIIGYTKHGFNQAISRNNGLGVSPKAILHTVKSGKMVIQKDRGTIKYTSKQAVVVLNKRGKIVTTFARGTK
YTRKGKNKRE

Sequences:

>Translated_250_residues
MYKWILGSGIRRTNDYHCNLRGDVVTITNQDKEVVATYEYDAWGNVVKSDTKGIAVDNPFGYAGYMYDKEIGMYYLIARY
YNPEHGVFLSVDPDPGDEDDPVTMNGYTYGDNNPVMMINPDGHLAWFIPVAVHEARIAAPHVGRFVGKQLAKRAITQPLK
YKNTKAVAGKIIGYTKHGFNQAISRNNGLGVSPKAILHTVKSGKMVIQKDRGTIKYTSKQAVVVLNKRGKIVTTFARGTK
YTRKGKNKRE
>Mature_250_residues
MYKWILGSGIRRTNDYHCNLRGDVVTITNQDKEVVATYEYDAWGNVVKSDTKGIAVDNPFGYAGYMYDKEIGMYYLIARY
YNPEHGVFLSVDPDPGDEDDPVTMNGYTYGDNNPVMMINPDGHLAWFIPVAVHEARIAAPHVGRFVGKQLAKRAITQPLK
YKNTKAVAGKIIGYTKHGFNQAISRNNGLGVSPKAILHTVKSGKMVIQKDRGTIKYTSKQAVVVLNKRGKIVTTFARGTK
YTRKGKNKRE

Specific function: Still unknown. Not involved in cell membrane metabolism, motility, secretion or differentiation [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008979
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 27984; Mature: 27984

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKWILGSGIRRTNDYHCNLRGDVVTITNQDKEVVATYEYDAWGNVVKSDTKGIAVDNPF
CEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCCCEEECCCCCEEECCCC
GYAGYMYDKEIGMYYLIARYYNPEHGVFLSVDPDPGDEDDPVTMNGYTYGDNNPVMMINP
CCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEECCEEECCCCCEEEECC
DGHLAWFIPVAVHEARIAAPHVGRFVGKQLAKRAITQPLKYKNTKAVAGKIIGYTKHGFN
CCCEEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEECCCHH
QAISRNNGLGVSPKAILHTVKSGKMVIQKDRGTIKYTSKQAVVVLNKRGKIVTTFARGTK
HHHHCCCCCCCCHHHHHEECCCCCEEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCC
YTRKGKNKRE
HHHCCCCCCC
>Mature Secondary Structure
MYKWILGSGIRRTNDYHCNLRGDVVTITNQDKEVVATYEYDAWGNVVKSDTKGIAVDNPF
CEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCCCEEECCCCCEEECCCC
GYAGYMYDKEIGMYYLIARYYNPEHGVFLSVDPDPGDEDDPVTMNGYTYGDNNPVMMINP
CCEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCEEECCEEECCCCCEEEECC
DGHLAWFIPVAVHEARIAAPHVGRFVGKQLAKRAITQPLKYKNTKAVAGKIIGYTKHGFN
CCCEEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEECCCHH
QAISRNNGLGVSPKAILHTVKSGKMVIQKDRGTIKYTSKQAVVVLNKRGKIVTTFARGTK
HHHHCCCCCCCCHHHHHEECCCCCEEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCC
YTRKGKNKRE
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8316082; 7704263; 8969509; 9384377; 10658653 [H]