Click here to switch to the map view.

The map label for this gene is ydbT [H]

Identifier: 49184006

GI number: 49184006

Start: 1038772

End: 1039116

Strand: Direct

Name: ydbT [H]

Synonym: BAS0985

Alternate gene names: 49184006

Gene position: 1038772-1039116 (Clockwise)

Preceding gene: 49184005

Following gene: 49184007

Centisome position: 19.87

GC content: 34.49

Gene sequence:

>345_bases
ATGTATAAGAGACAGCATCCGATCACGATGTTATTGGAATTAAAAATAAGAGATTTTATACCATTTATTATTTTTCTCCT
TAGTTTAAAAGGAAAGTTCCCATTTTGGTATTTAGTTCCTGTCGGTTTTGCGGTAATCACGATTGTTTCAGCTATCGTAG
GCTGGTATTACAAAGTATATTGGATTGAAAATAACGTATTACATGTGAAACAAGGTCTCTTTGTGAAGAAGGAGAGCTAC
TTAAATAAAGAACGTGTTCAAACAATCAATACAAGCTCTAACGTGTTATATCAAATGCTTGGCTTAAAGAAAATCCAAAT
TGAAACAGCTGGCGGGGGGCGATGA

Upstream 100 bases:

>100_bases
TCAACAGCAGCAACTTCTCACAGCATCCCAGGCTTAACGATGTATGAAGCAGAAATGTTGAAAACGAAAATCGCAGAATT
AGCGAAAGTGAGTGATGAGG

Downstream 100 bases:

>100_bases
TGCGGAGGTTAGCTTAGCCGGTATTACAGTAGAAGAGGCAACTGAGCTTATTGCTTTGCTAAATGAGCCAACTCCAGAAG
TGAAAGCAGAAGGAACGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MYKRQHPITMLLELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESY
LNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR

Sequences:

>Translated_114_residues
MYKRQHPITMLLELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESY
LNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR
>Mature_114_residues
MYKRQHPITMLLELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESY
LNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 13342; Mature: 13342

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKRQHPITMLLELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVY
CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEE
WIENNVLHVKQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR
EEECCEEEECCCCEEEHHHHCCHHHHHEECCCHHHHHHHHCCEEEEEEECCCCC
>Mature Secondary Structure
MYKRQHPITMLLELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVY
CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEE
WIENNVLHVKQGLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR
EEECCEEEECCCCEEEHHHHCCHHHHHEECCCHHHHHHHHCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]