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The map label for this gene is ygzD [H]

Identifier: 49183677

GI number: 49183677

Start: 704616

End: 704843

Strand: Direct

Name: ygzD [H]

Synonym: BAS0652

Alternate gene names: 49183677

Gene position: 704616-704843 (Clockwise)

Preceding gene: 49183676

Following gene: 49183678

Centisome position: 13.48

GC content: 35.09

Gene sequence:

>228_bases
GTGGTAAATTTGACCATTTTAAATAGAGTGAAGGAATTAAGAGCTCGGTTTAATTTTTCGCAAAGTGTATTAGCAGAAAA
AGTTGGAGTGACGAGACAAACAATCGCGGCAATTGAAAAAGGGGATTATGTTCCTTCATTATTATTAGCGCTTATGATTT
GCGATGTATTTCAGTTAAAGATGGAAGATGTGTTTGTTTTAAATAAGGAGGGGGAAGAGGATGAATAG

Upstream 100 bases:

>100_bases
AAAATCCAACTTTACATATTGTAAAGTTGGATTTTTTTGTGAAAATAATGTTAAGTTGAGTTTACATTTTGTTAAGGATA
GCATACAATAAAATTGAGAG

Downstream 100 bases:

>100_bases
ACTTGTATTTTCCTATATGTTGAATGTACTTTTAATGGTATTAGCAGGTTGGGCATTTATTGAGTTGTATTATTTTACTA
TTGAAGTTGCTAATTTTATT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MVNLTILNRVKELRARFNFSQSVLAEKVGVTRQTIAAIEKGDYVPSLLLALMICDVFQLKMEDVFVLNKEGEEDE

Sequences:

>Translated_75_residues
MVNLTILNRVKELRARFNFSQSVLAEKVGVTRQTIAAIEKGDYVPSLLLALMICDVFQLKMEDVFVLNKEGEEDE
>Mature_75_residues
MVNLTILNRVKELRARFNFSQSVLAEKVGVTRQTIAAIEKGDYVPSLLLALMICDVFQLKMEDVFVLNKEGEEDE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8531; Mature: 8531

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLTILNRVKELRARFNFSQSVLAEKVGVTRQTIAAIEKGDYVPSLLLALMICDVFQLK
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MEDVFVLNKEGEEDE
HHHEEEECCCCCCCC
>Mature Secondary Structure
MVNLTILNRVKELRARFNFSQSVLAEKVGVTRQTIAAIEKGDYVPSLLLALMICDVFQLK
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MEDVFVLNKEGEEDE
HHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]