| Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
|---|---|
| Accession | NC_005945 |
| Length | 5,228,663 |
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The map label for this gene is yhdW [H]
Identifier: 49183585
GI number: 49183585
Start: 602269
End: 604140
Strand: Direct
Name: yhdW [H]
Synonym: BAS0560
Alternate gene names: 49183585
Gene position: 602269-604140 (Clockwise)
Preceding gene: 49183584
Following gene: 49183586
Centisome position: 11.52
GC content: 33.07
Gene sequence:
>1872_bases ATGCAACACCGTAAAAGACTATCTATACCAGGGGTAATGGGACATTCCTTTCAAACAGTTAAATTTGCTTTTTGGAATGT ATTAACCTTTCAACTTGCTTATAAATTATTAGCAGCGATTGTATTCGTCCCGCTATTTGGGATCATTTTTAATAAGTTGT TGTATTTTGGTGGGTATGCAAATGCGACGAATGATGAATTATTAGCGTTTTTAAAGACACCATACGGCATTTTGGCAATC GTAATTTTATCATTGTTAGCGCTGTTTCTTATCTTTACGGAATTTGCGGTGCTTATTATTATTTCGTACTTTGCTCATAA AAGGCAAAAGGTGAGATTACGTCCAATTTTGTATAAAACAGTAACGTATTTACCTACTCTTTTCACATATTGCTTACCGG GATTTATTTTATATGCTGTCGTATTATTACCTCTTTTAAATATGGGATATGAAACAGCATTAATCCCGCAAATTCAAATT CCTAACTTCATTACAGGAGAACTGTTTAAGACAACGATGGGACAAGTGGGTTATTACACATTCTTTGCTGTAGTTGCGTA TTTGAACCTTCGCTGGATTTTTGTTCTACCTATTGTTGTTTTAGAACAAAAGCCATTTCGTGTGGCAGCACGTAAAAGTG CAAAGTTAGTAAAAGAAAGCTTTTTTAAAGTACTATTCTTTTTAGTAGGATTTTTTATTTCGATAGGAATTGTCTATGTC CTATTTTTAGGAATATATTTATTATGTCTATGGGGTGTTTATGAATTTACAAACCCAAAAGGGACATTTGCATTATTAGC GGAATCAACAATGTCTGTATTTCTAACGAGTACATTGTATTTATTTAGCTTTATCGTGACACCATTTTATATTATGGCGA TTACGCGATTGTATCTACAAAAGGTTCCAGTTGAAGATGTTTTATTAGAAGAAGGATTAGATTATTCGAAAACGAAAGCA GATAAATGTTTCTTCCAAAAACATCGTTGGAAATTTATTGGCGTATATATTGTGGGAATTATTACTGCGGGAATGGTTGT TGCCTTCATTGTAACCTTTATTACAAATACGTATAAAGAACCAATTATTATGGCTCATCGCGGTTATATTTCAAAAGGTG TAGAGAATACGAAAGAAGCTTTGCAAGGCGCTATTGATGCGAAAGCAGACTATGCTGAAATTGATGTTCTGCAAACAAAA GACGGTGAATTAGCAGTTATACATGATTTGAAGTTGAAACGCCTTGCTAATGCTAATGTTCACGTGTCAGATTTAACGAT GGACGAGTTAAGACAACTTACTCTCAGTCAAGATGGGTTTTCAGGACAAATAAGTACACTTGATGAGATTATTAAGCTGG CAAAAGGCAAAATCAAACTCAATATTGAAGTGAAGCTTCATGGGGGCGAAAAAGATTTTGTAAACAAAGTATTAAAAACG ATTAAAGATAATGAATTTGAAAAGCAATGTGTCATTCAAACGTTACACTATCCGCTTATCAAAGAATTTAAGCGTGCAAA TCCAAATATAAAAGTAGGATATATACTGTATGCAAGTAGAGCTCACTTAAAGAATGTGAAGGCTGATTTTTATGTAGCAG AAGAATACATGCTAAATAAGAAATTAGTAAAAGAAGCAAGGAAGTTAAACAAGCCAATTTATGTATGGACGGTAAATGAT ATGGAAAGTTTAAAGGGATACTATAAATTAAACGTAGATGGTATCATTACCGATTATCCTGAAGATGCACGTGAAACAAT TAAGATGTTAAAAGAGCAAGAAGAGGAAGAAAGTGATCTGTTTGATAAAATTACTGAAACAACAGATGATTTATTTTCCA AGTTATTTATAAGTTATCCAGCTGCTAGCTAA
Upstream 100 bases:
>100_bases AGTGTTCATGTTAAGCGGAATATATTATTATTAAAAAGATGGGTTAGAAATGGAAATATGGAATCCATCTCAAATATCGT TTTAGAATGTGGAGGAATAT
Downstream 100 bases:
>100_bases ATGCTAGCAGCTGTTTTTTATAAAAAGAATATATCTCTAAAGTATTGTGTAAATTAATAACTGTATATGTATACGACATC ATTGGGGTTTCTTACATTGT
Product: glycerophosphoryl diester phosphodiesterase family protein
Products: NA
Alternate protein names: Glycerophosphodiester phosphodiesterase [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPVEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVHVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS
Sequences:
>Translated_623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPVEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVHVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS >Mature_623_residues MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYANATNDELLAFLKTPYGILAI VILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKTVTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQI PNFITGELFKTTMGQVGYYTFFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQKVPVEDVLLEEGLDYSKTKA DKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKEPIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTK DGELAVIHDLKLKRLANANVHVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNKKLVKEARKLNKPIYVWTVND MESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDLFDKITETTDDLFSKLFISYPAAS
Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GDPD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004129 - InterPro: IPR017946 [H]
Pfam domain/function: PF03009 GDPD [H]
EC number: =3.1.4.46 [H]
Molecular weight: Translated: 71338; Mature: 71338
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATNDELLAFLKTPYGILAIVILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKT CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQIPNFITGELFKTTMGQVGYYT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH FFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPVEDVLLEEGLDYSKTKADKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKE HCCHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTKDGELAVIHDLKLKRLANANV CEEEEECCHHHHCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCC HVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT EEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHH IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNK HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHEEHHHHHHHH KLVKEARKLNKPIYVWTVNDMESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDL HHHHHHHHCCCCEEEEECCCHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHCHHHHHH FDKITETTDDLFSKLFISYPAAS HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQHRKRLSIPGVMGHSFQTVKFAFWNVLTFQLAYKLLAAIVFVPLFGIIFNKLLYFGGYA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NATNDELLAFLKTPYGILAIVILSLLALFLIFTEFAVLIIISYFAHKRQKVRLRPILYKT CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTYLPTLFTYCLPGFILYAVVLLPLLNMGYETALIPQIQIPNFITGELFKTTMGQVGYYT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH FFAVVAYLNLRWIFVLPIVVLEQKPFRVAARKSAKLVKESFFKVLFFLVGFFISIGIVYV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGIYLLCLWGVYEFTNPKGTFALLAESTMSVFLTSTLYLFSFIVTPFYIMAITRLYLQ HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVPVEDVLLEEGLDYSKTKADKCFFQKHRWKFIGVYIVGIITAGMVVAFIVTFITNTYKE HCCHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIIMAHRGYISKGVENTKEALQGAIDAKADYAEIDVLQTKDGELAVIHDLKLKRLANANV CEEEEECCHHHHCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCC HVSDLTMDELRQLTLSQDGFSGQISTLDEIIKLAKGKIKLNIEVKLHGGEKDFVNKVLKT EEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHH IKDNEFEKQCVIQTLHYPLIKEFKRANPNIKVGYILYASRAHLKNVKADFYVAEEYMLNK HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHCCCHHHEEHHHHHHHH KLVKEARKLNKPIYVWTVNDMESLKGYYKLNVDGIITDYPEDARETIKMLKEQEEEESDL HHHHHHHHCCCCEEEEECCCHHHCCCEEEEEECCEECCCCHHHHHHHHHHHHHCHHHHHH FDKITETTDDLFSKLFISYPAAS HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]