Click here to switch to the map view.

The map label for this gene is ugpA [H]

Identifier: 49183562

GI number: 49183562

Start: 574251

End: 575183

Strand: Direct

Name: ugpA [H]

Synonym: BAS0536

Alternate gene names: 49183562

Gene position: 574251-575183 (Clockwise)

Preceding gene: 49183561

Following gene: 49183563

Centisome position: 10.98

GC content: 33.01

Gene sequence:

>933_bases
ATGATCGAAGTGAGTAAGTTACCGGTTCAAACAAAAGTATCAAAAAAGAAAAATTTATGGGGGAGAACAAAAGATTTAAG
AATAGGATTATTGTTTTTGGCGCCATCTATTTTGCTATTTTCAATTTTTCTGTTCTATCCATTGTTTAGGACGATTTACT
ATAGTTTTTATTTAACCGATATACATGGAGAAGCTAATCTTTTCGTTGGCTTAGAAAATTATCAATATTTATTCTCTAAT
CCTGCCTTCTACAAAAGTATAAAATCAACTTTACTATTTGTTTTATATACAGTGCCTACGAGTATTATATTTGCTTTGTT
TCTTGCATTGATTGCAAACGGAAAGGTAAGAGGTATTGGGTTATTTCGAGTTCTGTTTTCTTCGACAATGGGAATATCAG
TAGCTGCTAGTGCAGTGATTTGGTTATTTTTATTTCATCCAAGTGTCGGGTTATTCAATAATATATTAGCTTCTATGAAT
CTTCCTGCAATTGCATGGTTAACGAGTCCGGACTGGGCACTATTCTCTGTATCAGTTACAACGGTTTGGGTGAATACAGG
ATTTGCATTTTTAGTTATATTAGGTGGTTTACAAAATATTGATACGTCTTTATATGAGAGTGCATCTATAGATGGTGCAA
GTTATCTATATAAGCTTCGTCGTGTTACATTACCGATGCTATCACCAACTTTATTCTTTATCGTGACAGTAACGTTAATT
AGTGCGTTCCAAAGCTTTGGACAAATTGATATTTTAACGCACGGTGGACCGAATGATGCAACAAATTTAATTGTATATTC
GATTTATAAAGAGGCATTTGTAAATCATCAATTTGGGACAGCAAGTGCACAAGCGATGGTACTATTTGTTTTCATTTTCA
TTGCTACATTACTTCAATTTAAGTTTGCTGAGAGAAAGGTGCATTATAAATGA

Upstream 100 bases:

>100_bases
AATTATTATTCTCGGAAGAAAAGTTATGCTTCTTTCATCAAAACACGAATGAACGCTTAAAAGTGGTAGCTGAAGAAGAG
TTGAAAGTGGTGGCGAAATA

Downstream 100 bases:

>100_bases
TTGTTAAACAGTGGAAACAAAATTTCCTGCTATACATGCTGCTCATAATTAGTGCAGTAATGGTATTTTTTCCTGTGCTA
TATGCGTTTTTAATAAGCTT

Product: glycerol-3-phosphate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIEVSKLPVQTKVSKKKNLWGRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSN
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK

Sequences:

>Translated_310_residues
MIEVSKLPVQTKVSKKKNLWGRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSN
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK
>Mature_310_residues
MIEVSKLPVQTKVSKKKNLWGRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTDIHGEANLFVGLENYQYLFSN
PAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIGLFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMN
LPAIAWLTSPDWALFSVSVTTVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQFKFAERKVHYK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=32.1799307958478, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=29.2307692307692, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=25.5905511811024, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34789; Mature: 34789

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVSKLPVQTKVSKKKNLWGRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IHGEANLFVGLENYQYLFSNPAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIG
ECCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC
>Mature Secondary Structure
MIEVSKLPVQTKVSKKKNLWGRTKDLRIGLLFLAPSILLFSIFLFYPLFRTIYYSFYLTD
CCCCCCCCCHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IHGEANLFVGLENYQYLFSNPAFYKSIKSTLLFVLYTVPTSIIFALFLALIANGKVRGIG
ECCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
LFRVLFSSTMGISVAASAVIWLFLFHPSVGLFNNILASMNLPAIAWLTSPDWALFSVSVT
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
TVWVNTGFAFLVILGGLQNIDTSLYESASIDGASYLYKLRRVTLPMLSPTLFFIVTVTLI
EEEEECCHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFQSFGQIDILTHGGPNDATNLIVYSIYKEAFVNHQFGTASAQAMVLFVFIFIATLLQF
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KFAERKVHYK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA