| Definition | Desulfovibrio vulgaris str. Hildenborough chromosome, complete genome. |
|---|---|
| Accession | NC_002937 |
| Length | 3,570,858 |
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Identifier: 46580113
GI number:
Start: 1777728
End: 1781027
Strand: Reverse
Name: Not Available
Synonym: DVU1703
Alternate gene names: NA
Gene position: NA
Preceding gene: 46580114
Following gene: 46580112
Centisome position: NA
GC content: NA
Gene sequence:
>3300_bases ATGCACCACCTACCAGAAACCAAGGAAGAATACAGCGCCAAGATTCCGGCCTTGCAGGTTCTCATGAATCTCGGCTGGAC GTATATATCGCCTTCGCAGTGCCTGACCAAGCGCGGCACGAACCGTGAGGTTTTGCTGAAGGATGAACTCATCCGTTCAC TCCAGGCACGGCGCTTTGAATGGGACGGCAGGGGGCACGCGCTTTCGCCCAATGCCATCGAGCATATTGTGCGCGAACTG TCATCGCCGGGGCTGCACGAGGGGCTACTCACCGCCAACGAGCGCATCTACGACAAGCTGACCCTCGGCATCACGGTCAA GGAATTCATTGACGGCAAGCCCGTTCAGCCGACCATCCCCATCATCGACTGGGAGCACCCCGAAAACAACCTGTTCCACG TCACCGAAGAGATGGACGTGCTGTCTTCGGCTGGCACGCATAGGCGCATCCCTGACATTGTGTGCTTCGTCAACGGCATC CCTTTTGTGGTCATCGAGGCAAAGCGGCCTGAATCCGGCAATCCGAACAAGTCCATGCTGGAGGAAGGCGTCAGCCAGTC CATCCGCAATCAGAAGAAGGACGAAATTCCGCACCTCTTCTGCTATGCGCAACTGCTCATGGCCATCAGCAACACCGAAG GACGCTACGCCACCACCAAGACGCCCAAGAAGTTCTGGGCCACGTGGCGCGAGGAAATCTTCGACGACGTCACCTTCCAC ACCATCAAGAACACGCCGCTTTCAGCGGATGCCAAGGACGCGCTTTTTCAGGACCGCCCCAAGGCCATGCGGAACTACTT TGAATCGCTGTGGTCCGGCGACGTTCTGCCCACACAGCAGGACAAGCTGCTTGTCAGCCTATTGCGAAAGGACCGCCTGC TGAAGCTGGTGCAGTATTACATTCTCTTCGATAAGCGCGTCGGCAAGATTGTGGCGCGGTATCAGCAGGCATTCGGCATC AGAGCCATGCTGGAGCGCGTGAAGCGGCTGGACAAGGCCGGAAGCCGCGAGGGCGGCGTTATCTGGCACACCACAGGTTC CGGCAAGTCCTTCACCATGGTCTTCCTTAGCAAGGCGCTTCTGCTGGAACCGGACCTCAGGGACTGCCGCGTCATCATCG TCACGGACCGCGTTGACCTTGAAAAACAGCTCTCCAGAACGTTCCTCACGGGTGGCGCGTTCGGCTCTGCCGTTGCCACC AAGAAGGAAGGCGAACGGGCAAGAGCGGGGTCCGGTCGTGACCTCGCCCAGCGCATCGGCAAGGGCGATGACCGCATCAT CTTTTCCATCATCGACAAGTTCAACACAGCGTCCAAGCTGCCGGAGTGCTACAACCCCAGCGACAAGATCATCGTGCTGG TAGACGAGGGCCACCGCAGCCACGGCGGTGAAACCCACGAGCGTATGCGCAAGGCGCTGCCCAATGCGGCGTACATCGCC TTTACCGGAACGCCGCTTCTCAAGGACGACAAGACGCAGAACAAGTTCGGTCCCATCATTCACGCCTACACCATGCAGCG CGCCGTGGAGGATGGAACGGTCACGCCACTGCTCTACGAAGAGCGCCGCCCTGAACTGGCCGTGAACGAAGCCGCCATTG ACAACTGGTTCGACAAGATCACGGCGCGGCTGACCGAAGAGCAGAAGACCGACCTCAAAAAGAAATTCGCCAACAAGGGC GCGGTGTACGGCTCCGAGAACCGCATTGAACTCATCGCGTGGGACATTGCCACCCATTTCTCGGACCACATCAAAACCCT CGGCATGGGACTCAAGGGCCAACTCGCCGCAGATTCCAAGCTCTCCGCAGTCCGCTACAAGAAGCATCTCGATGCCACAG GACTGGTAACAAGTGCCGTGGTCATCTCGCCGCCGGACACTCGCGAAGGCCACGCAGACGTGGACGAATCCGCTTTGCCG GAGGTGCAGCAGTGGGCCGAGAAGACCGTGGGCAAGAGCGCCAGCGCCGAACAGTACAAGCAATACGAGCAACGCGTCAT CGAGGACTTTGCCACCGACGACGGCGTGGACATCCTTATCGTAGTGGACAAACTGCTGACGGGCTTTGACGAACCGAGGA ACACGGTTCTGTACATCGACAAGCCGCTGAAAGAGCACAACCTGCTTCAGGCAATCGCACGCGTGAACCGCCTGCACGAG GCCAAGGAATACGGCCTGCTCATCGACTATCGCGGCATCCTCAAGGAACTGGATACGACACTCAAGGAATATCAGGACCT TCAGGAACGCACGCAAAGCGGCTTTGACGTGGACGACATCGAGGGGCTGTATCATCAGGTCGGCACCGAATACAAACGCC TGCCGGAGCAGCACAAACGCCTGTGGGGAATATTCAGGGACGTCAAGAACAGGCAGGACCTTGAGCAGTACCGACAAATC CTCATGCCGCAGTACACGGAGGATGACGACGGAACCAGCATCGACCTGCGCCAGAAGGTGCGAGAGGACTTCTACCAGGC GCTCACGGAGTTCGGCCTGTGTCTCAAGGTGGCGCTTTCGTCACGCTCGTTCTTTGAGGATGGCAGCTTCAGCGAAAAGG ACATCGCCAAGTACAAAAGCGATCTGCGATTCTTCACGAACCTGCGCAAGATAGCGCGTCAGGACGCACAGGAAACGGTT GACTACAGCGCCTACGAGGAGCAGATACGCCGACTCGTGGACAAGCACGTGGTCGGAGAATCCATCGAAGACCCAGAGGG CGTTGTGCTGGTGGACGATATCGGCAAGGAAAAGCCGGAAGACTGGTCAAAGGAGAAGACGCGTAACGAGACGGACATCA TCCGCACACGCGTCCGAAAGACCATCGAGCAGGAACTCAGCGACGACCCGTATGCCCAGAAGGTCTTTTCCGAACTGCTG AAGGACGCCATTTCGCAAGCCGAAAAGATGTTCGAACATCCCTTCAAGCAATACGCCCTTTTCAAGGAATTCGAGGACCA GCTGAACAACCGCGCCGTGTCAGGCATACCGGACGAGCTTGATGGCAGCGAGACTGCCAAGGCGTACTACGGCACATTCC GGCTGGTGCTGGGCGAAGACCACTTCAAAGCCATCCCGCCGGATGAAGAAAAGAAGCTCATTGAGGAAGCCAAGGCCATC GACTCCATCGTCGGCACCGCCGTTGTAGAGCACTCACTAAGTCCGCAGGCGATGGAATCCACCATTCACAAGGGCATCCT GCCGCGTCTGTTCAAGCTCATCGGGCTTGAAAAAGCAAAGGATGTCATCGAACACGTTATTCAGATTACCAGAGTGCGTC TGGCCCATGGAAACAGATAA
Upstream 100 bases:
>100_bases CTGCCAACGGGAGTCGTTGCAGGCGCAAGGGGCCAACAAGTCGTCGCGACTTATGCGAAAACGCCCTCGATTTCAAGGCG ACTCCCATTAGAAGAGTATC
Downstream 100 bases:
>100_bases GACAATCATGCAAACACTCACCTATGGCGATGAACGCATTCGCTATCAAGTGTGTCACGTGCCGGGGCGGAAGGCGAAAG TCGCCATCCATGTGCATCCG
Product: type I restriction-modification enzyme, R subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1099_residues MHHLPETKEEYSAKIPALQVLMNLGWTYISPSQCLTKRGTNREVLLKDELIRSLQARRFEWDGRGHALSPNAIEHIVREL SSPGLHEGLLTANERIYDKLTLGITVKEFIDGKPVQPTIPIIDWEHPENNLFHVTEEMDVLSSAGTHRRIPDIVCFVNGI PFVVIEAKRPESGNPNKSMLEEGVSQSIRNQKKDEIPHLFCYAQLLMAISNTEGRYATTKTPKKFWATWREEIFDDVTFH TIKNTPLSADAKDALFQDRPKAMRNYFESLWSGDVLPTQQDKLLVSLLRKDRLLKLVQYYILFDKRVGKIVARYQQAFGI RAMLERVKRLDKAGSREGGVIWHTTGSGKSFTMVFLSKALLLEPDLRDCRVIIVTDRVDLEKQLSRTFLTGGAFGSAVAT KKEGERARAGSGRDLAQRIGKGDDRIIFSIIDKFNTASKLPECYNPSDKIIVLVDEGHRSHGGETHERMRKALPNAAYIA FTGTPLLKDDKTQNKFGPIIHAYTMQRAVEDGTVTPLLYEERRPELAVNEAAIDNWFDKITARLTEEQKTDLKKKFANKG AVYGSENRIELIAWDIATHFSDHIKTLGMGLKGQLAADSKLSAVRYKKHLDATGLVTSAVVISPPDTREGHADVDESALP EVQQWAEKTVGKSASAEQYKQYEQRVIEDFATDDGVDILIVVDKLLTGFDEPRNTVLYIDKPLKEHNLLQAIARVNRLHE AKEYGLLIDYRGILKELDTTLKEYQDLQERTQSGFDVDDIEGLYHQVGTEYKRLPEQHKRLWGIFRDVKNRQDLEQYRQI LMPQYTEDDDGTSIDLRQKVREDFYQALTEFGLCLKVALSSRSFFEDGSFSEKDIAKYKSDLRFFTNLRKIARQDAQETV DYSAYEEQIRRLVDKHVVGESIEDPEGVVLVDDIGKEKPEDWSKEKTRNETDIIRTRVRKTIEQELSDDPYAQKVFSELL KDAISQAEKMFEHPFKQYALFKEFEDQLNNRAVSGIPDELDGSETAKAYYGTFRLVLGEDHFKAIPPDEEKKLIEEAKAI DSIVGTAVVEHSLSPQAMESTIHKGILPRLFKLIGLEKAKDVIEHVIQITRVRLAHGNR
Sequences:
NA
Specific function: NA
COG id: COG0610
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA