| Definition | Desulfovibrio vulgaris str. Hildenborough chromosome, complete genome. |
|---|---|
| Accession | NC_002937 |
| Length | 3,570,858 |
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The map label for this gene is ligA
Identifier: 46580019
GI number:
Start: 1690678
End: 1693077
Strand: Direct
Name: ligA
Synonym: DVU1608
Alternate gene names: NA
Gene position: NA
Preceding gene: 46580018
Following gene: 46580020
Centisome position: NA
GC content: NA
Gene sequence:
>2400_bases ATGACCGAAGTGAAGACGGGCCGCGTTGTCGACGATGCCCCTGTGAACGATGCCCCTGAGAACAATGCCGCAGAAGCGAC GTCTCCCGCCCGGCATGACGCGATTCCCGAAGAGGCCCGCCAGCGCGCCGCACAACTTCGGGCAGACCTTGAGCGGCATA ACCGCCTCTACTACGAACTTGATACGCCCGAGATAAGCGACGCCGAATACGATGCCCTCTATCGTGAACTCGTGGGCCTT GAAACTCGCTGGCCCGCATTGCGGGACGAGGCCTCGCCCACGCAGAGAGTCGGCGGTGAAGTGCTCGAAGGGCTTGAGAA ACAGGCGCACACCCTGCGTATGTACAGCCTCGACAACGCCTTCTCACGCGACGAGTGGGGGGCGTTCATTCAGCGCATGT ACAACGCCCTTCCTGACGCCCCTTCGGCCTTCTGGTGCGACCCCAAGATGGACGGCCTCGCGCTGGAGGTCATCTACGAG AATGGCGTCTTCACTTCGGCGTTGACACGGGGCAACGGTGAAGTGGGCGAGGTCGTCACCGCCGCCATGCGGACGGTGCG CAACCTGCCCCTTGCCCTGCGCGGAGACGACGTGCCGCGCCGTATCGAGGTGCGCGGCGAAGTGGTCATCGCAAAGGCCG ACTTCGAACAACTCAACGCGCGGCAATCTGCCGCCGGGGGCAAGCTTTTCGCCAACCCGCGCAATGCGGCGGCGGGGTCG GTGCGACAACTCGATACAACCGTCACCGCCGGAAGGCCCTTGCAGTTTCTCGCCTATGGCGTGGGACAGGTGGTCCTCGA AGGCGGCACCGCGCCGTGGACGACCCATAGCGGCCTCATGGCAAGGCTTCGTGAATGGGGGTTCGATACGCCGCCGGAGG GCCGTCTGTGTGCTTCGCCGGACGAGGTGTGGGCATACTACGAGGCGCTTGGCGCACGTCGAGAGTCGCTTGCCATCGAG ATAGACGGGGTCGTCGCGAAGCTTGATGACACCGAGGCGCAGGAAGCCCTCGGTTTCACGGCGCGTGCCCCACGGTGGGC ACTGGCCCTCAAGTTTCCTGCGATGCAGGCGCGTACGCGTCTCGATGACATCCGTGTGCAAGTGGGGCGCACCGGGGTGC TTACACCGGTGGCGATACTCGAACCCGTGCGCGTGGGCGGTGTAGAGGTCTCGCGTGCAACGCTTCACAACGAGGACGAG ATTCGCGCCAAGGGACTGATGCTGGGCGACATGGTGCTGGTACAACGCGCTGGCGATGTCATCCCCGAGGTGGTGCGCCC ACTGGTCGAAGAACGCACTGGTGACGAACGGCCCTTCGTCTTTCCGGAAAACTGTCCGGAATGCGATAGCCCTGTGGTCA GACCCCAAGGCGAGGTGGCGCACCGGTGCGTCAATGTCATGTGTCCTGCGGTGCGCAGGCAGTCCATCATCCATTTCGTC TCCAAGGCGGGCCTCGATGTGCGCGGCGTGGGTGAACGATGGGTGCAGCAGCTTGTGGACGGCGGGCATGTGACCTCACC CGTCGGGCTTTTCTTGCTGACCAAGCTCGACCTGATGCGTTTCGAGCGCATGGGGCCGACTTCTGCCGCCAATTTCGTCA CCGCGCTCGATGCCGCCCGCACAGGGGCGACGCTTGTCCGGCTCATCTGCGCCCTCGGCATCCGTCATGTGGGTGAACAG ACGGCACGTACCCTTGCCGCGAACTTCACCGACCTTGACGCCCTGCGTGAGGCCGACGCCGAGACCTTGCAGCAGTTGCC CGACATCGGCCCTGAAGTGGCAGGTTCCATTCGCAGCTTCTTCGCCAACGAGGGCAATCTCGAACTGCTTGAACGGTTGC GTGCCATCGGCCTATGGCCGAAGCGGCAGGATGCTCCGCCGGCTTCGGAGGGCGCTGATGCCATCGTACTCCCCCTGCAA GGACTGAAGGTGCTCTTCACCGGAAGCCTCACCCGTGTGGGACGCACCGAGGCCGAAGATATGGCGCGGGCTGCGGGGGC CAATATCGCCAGCAGCGTCACCAAGTCTCTTGACCTTCTTGTCGTCGGCGGTAAGCCCGGTTCGAAACTCGAAAAGGCCC GAAAGCTTGGCATCCGGGTCATGGAAGAGGCGGATTTCTTCGCCATGCTTGCGTCGGGAGTCGCATCTGTTGATGCTTCC GAAGCCGTCGCGGAGGAGACTCCGCCCTCTCAGGAAGCCGCAGGCGCTGAGGATGCTCCTTCGCAGGGCGCGGCCCATGT CCGCACGGCTTCCGACGAAACGGGGTCCGCATCGGGCGATGATTCTCGCGGCGCGGCGGCAGAGAATGATCCTGCCCGTC CCGCACGCGGGGGCGCGATGAGCACCGCTGAAGGTGAAGACGTGCCACGGGGCAGGGCAGAGCAACTGAAGCTGTTCTGA
Upstream 100 bases:
>100_bases CCGTGCGTACCATGCAACAGAACATCATACACGAGCGCATCCAGTGACCCGACCCGACGATAATGGCCGCGACGCCAACA AGACGCAGGCGTCATCTCCC
Downstream 100 bases:
>100_bases CGTTCTGCACCGAAACGGGAGGTGGACGTGGACTTGGCAAGTAGCCTATGCACGTTCAGGTCACCTGATACGCTGGTTGA ACGTATCCCGCTGTCGTCGG
Product: DNA ligase, NAD-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>799_residues MTEVKTGRVVDDAPVNDAPENNAAEATSPARHDAIPEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGL ETRWPALRDEASPTQRVGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPSAFWCDPKMDGLALEVIYE NGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGS VRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTTHSGLMARLREWGFDTPPEGRLCASPDEVWAYYEALGARRESLAIE IDGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATLHNEDE IRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVFPENCPECDSPVVRPQGEVAHRCVNVMCPAVRRQSIIHFV SKAGLDVRGVGERWVQQLVDGGHVTSPVGLFLLTKLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQ TARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGLWPKRQDAPPASEGADAIVLPLQ GLKVLFTGSLTRVGRTEAEDMARAAGANIASSVTKSLDLLVVGGKPGSKLEKARKLGIRVMEEADFFAMLASGVASVDAS EAVAEETPPSQEAAGAEDAPSQGAAHVRTASDETGSASGDDSRGAAAENDPARPARGGAMSTAEGEDVPRGRAEQLKLF
Sequences:
NA
Specific function: NA
COG id: COG0272
COG function: function code L; NAD-dependent DNA ligase (contains BRCT domain type II)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA