Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46447657

Identifier: 46447657

GI number: 46447657

Start: 2404926

End: 2406377

Strand: Reverse

Name: 46447657

Synonym: pc2023

Alternate gene names: NA

Gene position: 2406377-2404926 (Counterclockwise)

Preceding gene: 46447661

Following gene: 46447656

Centisome position: 99.67

GC content: 31.89

Gene sequence:

>1452_bases
ATGATATTATCTACAGCTACAGCATCACCAGCAGCTACAGTATCACCAGCGAATTTAGAAGAATTGCTTCAAGCGCAGAA
AGAAATGGACGCAAGGATCACGAATCTTGATAATATCCTTTTAAAAGCTCAGGAAAAAGCTGATGAACAAGTTAGAAAGC
TTGCTAATGAACTCTCTAGAGTTAAAGATGATAATACTAGTCTTAATGGCAGAATTAACATTCTTAGTGATGATAATACT
AGCCTTAATAACAGAATTAACATTCTTAATAAGGATAATGACAGTCTTCGAAATCAAATCGAGGAACAAAATCTGAAAAT
AACTTTGCTTAGTGAAGAATCTCGAATAGTTGAAGGAACTTTAAAAACTACTCAAAAAACTTTAGAAGAAAAAACTAAGC
AAATAGCAGAAATTCAAGAAACGCTTGAAAAATACGAAAAAGAAAAACAAGAGCTTTCTGAGAAAAATACAAAGCTTGTC
AATGAAAATGCCGAACTTGTCAAGGAAAAAGAGGGTTTAAATGCACTTTTAGAAGCTTTACGCAAAGAAAAAGCTGATCT
TGAAAATAAAGAGAAAGCATATCAAGAAGAAATAGAAGCGCTCAGTGTAGTTTTAGATGAGACATTAAAATGTCAACTTG
AATTGGAAAAAAACCATCAATTGGAAATTTCTGAAAAAACAAAAATAATAGCCAAGCAACAGCTTAAATGCGAAAATTAT
GAAAAAGAAGCTCTTTCAAATACAAATAAATTAGTTGAAACGGAAAAAGACCGAGATGAAGCTAAACACAAATTGAGTTT
AGAGCAAACAAAACATATTAAAACAAGACAAAAATTGTTTGAAGAACAAGAAAAGTATATTACAGCAAGCCGGATGTTAG
ACAAAGAACAAAAATCGCACTCTGAAACAAGCAAGAGCTTGCTTATAGAGCAAACAGCACGTGCTATTACAAACCAAATT
TTGTTTAAAGAAAAAGCAGAACATACTGATACAAAGCAGAAATTAGATTTAGAGCAAGCAAAATATGCAGCAGCAAAAGA
AGATTTAAATAAAGCCAAGATCGATGCTGAGAAAGCGCAAGAAGATCTCATTAATTCAATTCAAAAGCAATTAGATGAAA
TGCTCAATACTCATGAAGATGAATTAACAAAAATAAAAGACAATTACACTAAATTGCAAGAAGGTGTACAAGCTCAAAAA
AATGAACTTAAAAAGATTGTTTCGAGACTTAGCAATATAAATTTGCAAGATCCTCAGCTGTTTAGAATGTGGATATTAGA
TTTTGCTATGTTTGCCGGTTTAAATATCGAAGACCGAAAAAGCTTGGAAACTAAAATATCTCAACTTCATCAGCAGCTAG
CAAGCCCAACCAACCTAATTTCATGGAAACATCTTGTATTACAATTTTGCAATACATTGATTACAACAGCAATAGTTAGA
AAGGTGAGTTAA

Upstream 100 bases:

>100_bases
TATATTGGCTATACAAATGACTTTGATAGCAATAAAAAAAGGCATTTATAAATAATCAACTCCTTTAAGTTATTTAAACA
ATTTTCAAGAGGTAAATATT

Downstream 100 bases:

>100_bases
TTAAAGAATTGCTTTAGCTAAAACACAGGTTGGAAAAAATTCTAACCTGTTTTAATATTTATTATATCTTTGTTATACAA
GGGGTATCCTTATGTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MILSTATASPAATVSPANLEELLQAQKEMDARITNLDNILLKAQEKADEQVRKLANELSRVKDDNTSLNGRINILSDDNT
SLNNRINILNKDNDSLRNQIEEQNLKITLLSEESRIVEGTLKTTQKTLEEKTKQIAEIQETLEKYEKEKQELSEKNTKLV
NENAELVKEKEGLNALLEALRKEKADLENKEKAYQEEIEALSVVLDETLKCQLELEKNHQLEISEKTKIIAKQQLKCENY
EKEALSNTNKLVETEKDRDEAKHKLSLEQTKHIKTRQKLFEEQEKYITASRMLDKEQKSHSETSKSLLIEQTARAITNQI
LFKEKAEHTDTKQKLDLEQAKYAAAKEDLNKAKIDAEKAQEDLINSIQKQLDEMLNTHEDELTKIKDNYTKLQEGVQAQK
NELKKIVSRLSNINLQDPQLFRMWILDFAMFAGLNIEDRKSLETKISQLHQQLASPTNLISWKHLVLQFCNTLITTAIVR
KVS

Sequences:

>Translated_483_residues
MILSTATASPAATVSPANLEELLQAQKEMDARITNLDNILLKAQEKADEQVRKLANELSRVKDDNTSLNGRINILSDDNT
SLNNRINILNKDNDSLRNQIEEQNLKITLLSEESRIVEGTLKTTQKTLEEKTKQIAEIQETLEKYEKEKQELSEKNTKLV
NENAELVKEKEGLNALLEALRKEKADLENKEKAYQEEIEALSVVLDETLKCQLELEKNHQLEISEKTKIIAKQQLKCENY
EKEALSNTNKLVETEKDRDEAKHKLSLEQTKHIKTRQKLFEEQEKYITASRMLDKEQKSHSETSKSLLIEQTARAITNQI
LFKEKAEHTDTKQKLDLEQAKYAAAKEDLNKAKIDAEKAQEDLINSIQKQLDEMLNTHEDELTKIKDNYTKLQEGVQAQK
NELKKIVSRLSNINLQDPQLFRMWILDFAMFAGLNIEDRKSLETKISQLHQQLASPTNLISWKHLVLQFCNTLITTAIVR
KVS
>Mature_483_residues
MILSTATASPAATVSPANLEELLQAQKEMDARITNLDNILLKAQEKADEQVRKLANELSRVKDDNTSLNGRINILSDDNT
SLNNRINILNKDNDSLRNQIEEQNLKITLLSEESRIVEGTLKTTQKTLEEKTKQIAEIQETLEKYEKEKQELSEKNTKLV
NENAELVKEKEGLNALLEALRKEKADLENKEKAYQEEIEALSVVLDETLKCQLELEKNHQLEISEKTKIIAKQQLKCENY
EKEALSNTNKLVETEKDRDEAKHKLSLEQTKHIKTRQKLFEEQEKYITASRMLDKEQKSHSETSKSLLIEQTARAITNQI
LFKEKAEHTDTKQKLDLEQAKYAAAKEDLNKAKIDAEKAQEDLINSIQKQLDEMLNTHEDELTKIKDNYTKLQEGVQAQK
NELKKIVSRLSNINLQDPQLFRMWILDFAMFAGLNIEDRKSLETKISQLHQQLASPTNLISWKHLVLQFCNTLITTAIVR
KVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55583; Mature: 55583

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSTATASPAATVSPANLEELLQAQKEMDARITNLDNILLKAQEKADEQVRKLANELSR
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDDNTSLNGRINILSDDNTSLNNRINILNKDNDSLRNQIEEQNLKITLLSEESRIVEGT
HCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCHHHHHH
LKTTQKTLEEKTKQIAEIQETLEKYEKEKQELSEKNTKLVNENAELVKEKEGLNALLEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RKEKADLENKEKAYQEEIEALSVVLDETLKCQLELEKNHQLEISEKTKIIAKQQLKCENY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHH
EKEALSNTNKLVETEKDRDEAKHKLSLEQTKHIKTRQKLFEEQEKYITASRMLDKEQKSH
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SETSKSLLIEQTARAITNQILFKEKAEHTDTKQKLDLEQAKYAAAKEDLNKAKIDAEKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EDLINSIQKQLDEMLNTHEDELTKIKDNYTKLQEGVQAQKNELKKIVSRLSNINLQDPQL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FRMWILDFAMFAGLNIEDRKSLETKISQLHQQLASPTNLISWKHLVLQFCNTLITTAIVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVS
HCC
>Mature Secondary Structure
MILSTATASPAATVSPANLEELLQAQKEMDARITNLDNILLKAQEKADEQVRKLANELSR
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDDNTSLNGRINILSDDNTSLNNRINILNKDNDSLRNQIEEQNLKITLLSEESRIVEGT
HCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCHHHHHH
LKTTQKTLEEKTKQIAEIQETLEKYEKEKQELSEKNTKLVNENAELVKEKEGLNALLEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RKEKADLENKEKAYQEEIEALSVVLDETLKCQLELEKNHQLEISEKTKIIAKQQLKCENY
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHH
EKEALSNTNKLVETEKDRDEAKHKLSLEQTKHIKTRQKLFEEQEKYITASRMLDKEQKSH
HHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SETSKSLLIEQTARAITNQILFKEKAEHTDTKQKLDLEQAKYAAAKEDLNKAKIDAEKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EDLINSIQKQLDEMLNTHEDELTKIKDNYTKLQEGVQAQKNELKKIVSRLSNINLQDPQL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FRMWILDFAMFAGLNIEDRKSLETKISQLHQQLASPTNLISWKHLVLQFCNTLITTAIVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA