| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447642
Identifier: 46447642
GI number: 46447642
Start: 2387591
End: 2387839
Strand: Reverse
Name: 46447642
Synonym: pc2008
Alternate gene names: NA
Gene position: 2387839-2387591 (Counterclockwise)
Preceding gene: 46447643
Following gene: 46447641
Centisome position: 98.9
GC content: 32.93
Gene sequence:
>249_bases ATGGATATAGCTGAAAATAATGTTGTTCGATTTATTAGCATTACAAAGAAAAAAGATGGTATGTTCGCTAATTTCCGCGT AAAAGGAATGAAAGGAGGAGTGACATTTAGCTCTTCTATTAGTGTAGATATTAGTCAAGCTAATGTACATGCTGGAGATC CTTTAGAAAAAATTATCGAAGAATGTGGACGTATAGCAGTCAGAATGTTCGAAACTAAACTCCAATTTGAAGGTCTCATC AAAATATAA
Upstream 100 bases:
>100_bases TTTTCTGCTTTTGCCTGTGATGCAAACGAATATTTGATCAAGATTGACTAGAATGATTATTCCATTTATAGTATTGACCA TTTTATAGGTTAAAATCACC
Downstream 100 bases:
>100_bases TCTTTTATCTGGGTGTAGCGCAGCTTGGCTAGCGCACTTGCATGGGGTGCAAGGGGTCGGAAGTTCAAATCTTCTCACCC AGATTCTTTTATATCAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDIAENNVVRFISITKKKDGMFANFRVKGMKGGVTFSSSISVDISQANVHAGDPLEKIIEECGRIAVRMFETKLQFEGLI KI
Sequences:
>Translated_82_residues MDIAENNVVRFISITKKKDGMFANFRVKGMKGGVTFSSSISVDISQANVHAGDPLEKIIEECGRIAVRMFETKLQFEGLI KI >Mature_82_residues MDIAENNVVRFISITKKKDGMFANFRVKGMKGGVTFSSSISVDISQANVHAGDPLEKIIEECGRIAVRMFETKLQFEGLI KI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9107; Mature: 9107
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIAENNVVRFISITKKKDGMFANFRVKGMKGGVTFSSSISVDISQANVHAGDPLEKIIE CCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCHHHHHH ECGRIAVRMFETKLQFEGLIKI HHHHHHHHHHHHHHCEEEEECC >Mature Secondary Structure MDIAENNVVRFISITKKKDGMFANFRVKGMKGGVTFSSSISVDISQANVHAGDPLEKIIE CCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCHHHHHH ECGRIAVRMFETKLQFEGLIKI HHHHHHHHHHHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA