Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447618

Identifier: 46447618

GI number: 46447618

Start: 2363677

End: 2366031

Strand: Reverse

Name: 46447618

Synonym: pc1984

Alternate gene names: NA

Gene position: 2366031-2363677 (Counterclockwise)

Preceding gene: 46447619

Following gene: 46447617

Centisome position: 97.99

GC content: 33.72

Gene sequence:

>2355_bases
ATGATTAAAGATTTATTAGATCAATTTATAGATTTGTATGAGCAGGAATCAAAAACAGAAGCTTTACGATTAATTTTACC
TTCTCCGATGATTGCTTATGATGATTTATTTTCGAAAGATCGAGTCTTTTTTTATTTTGTTAATTTTGTTGATGCGGCAG
TGTTTAAAGGCGCATTAGAATTTAAAGCTACTTTTTTAGTTTTAGAGTCTTTATGCCAAGAATATCCCTCTTTAAAGTTT
TTAGGAGAACGTTTTTTAGAATGCATTCGTCTTGAATATGACTTATTTACTTTTTTTTCTAATCCTTCGAGTCTTGATGA
GCATTGTCCTCCCCAATTGAAGACATTTTTTCAATGGATTCATAAAGGAATTTTATCTCAGGAATTTCCGCTAGAAGAAC
TACTTAAAAGCTTTCCATTGCAAATTCAGACTTTATTTAGTAAAAAATTGGTGGTTTTAAAAGGATGGGAAAGATTAAAG
CAAGTTAAATCAACTTTTATCCAATCACTGGGTGAAAATTTGACGGTATATAAACAGCCTTGGCATTGTTTTTCTTATTC
TTTGAAAATCAACCCCAAACAAAAAAATATTTCAGGCTGGCCTTTAATATTTTTAGAACCTGTTGAAGGATTTGATTATC
ATTCTTTTCTACAAACGTATTGTTCTAAAAAATGTTTGATCATTTTTCCAACAGTTTCTCATTTATTTCAAATTTTGCAA
TTTGAAGACATCCATGAAATATTTATGAGAGAGCATGTTTATCTCTATGTTTTAGATATCTATCCTCATCAACAATTTTT
AAGCCAACATTTGCTTTGGGAGCAAAACGATTCTTTCGATTTGATTGAGATGGTGCCTAATCCACAAATAGAAAAGTTTT
TTCCAGCTCTTGAAATAGCCCTTAAAGCATGTTTAATTCAATCAAAAGAATTACTTAAGCGAGATACGGAGCAAGGCAAT
GGGTTATATGCTTTAGGTAAAAAATTTGTTTTTGATATGGAATCTCATCGATATGGAACAAATCGTGCCGTTGCCTTGGG
TATTGAGCAAGGATTACGACAATGGTATGATCCTCATAAAGGAGCTATTCCGTTAGGGGCTGATTTAGGTCCTTTAACAA
GAAACTACTTGCAAGAAGTTATTCAAGAAAGAATGACTCAAAGGAAAGTTAAAAAATTTCAACCCAATCAAAAAATTAAA
CTTGCTCATATCGTTCCTCAAATAGTAGATGGTGGACATGCCCCTTCAAAGCTTTTAACAACAATCTGTACATTTACAGA
TCAAAAATGGTTTAACCTTTCAATCTTTAGTACAGAAAGACTAGCCGAGCATTTACTAAGTTATCCAATCAACTCTTACC
ATTCTGGCTCTTCTGTTATTAGAGGCAATTTAACTTTGAATCATTTCAAACAATTGGGTGTAAAGGTTGCTATTGATCCC
GATTCGCCTACGTATGAATTGACCGTGAAAGAGGCTCTGGATTTTTTAGAACAGCAGTCCATTGATGTCGTTATTTTTCA
TGGACCTGATGAATTAAATAGTTTAATTAGTAGTTCAACTTCTGTCCCCATTCGCGTTTTATTTGATCATGGAACTCTTC
CTTTATTCCCATGCTTTGATTTAGTTATTTTGAGTACGGAAGAAGCTTACGTGCAAAATCGCGAAAAATTTCGCTTACAA
GGGATGGAAAGTTGTGTTCTCCCTTTTTCTATTAATGTTCGCCAAGGATGGAATGAAAAACCTTTTTCTAAAGAAGAGCT
TGGTTTACCTAAGGATAGTTTTGTGTTAACAACCATTTCTCATCATTTGGATACTCGAGTGTCTGAAGAAATGTTGCATG
CGATTGCTAAAATATTGAAAAAATGTCCGAAAGCTATCTATGCACCAATTGGAGAGGTTACAAAACAAGAAAAATGGAAA
GAAATTTTAGATCAATATGGTGTCAAAGATAAGTTGTTTTTTCTTGGCACACATTCCAATCCAAGTCAATATGCTCGCTC
AATGGAACTTTATCTCAATGAATTTCCTTTCGGCAGTGGGTTAGCCCTATTAGATGCGATGGCAGCTGGATGCCCAGTTG
TTTCTATGTACGAAGAAAATGGACCTCAACAGGCTCGTTATGCAGCAACTTACTTTGGTATTGATTATGTCGTTAAAACG
GGTCGAGTAGACGATTACATTGAATTAGCATGCCGCCTGATTGAAAACCCGGTTCTTTATCGAGAATGGTCTGTACACGC
CCTTAATCAATATGAAAAAAGAGTAGACACAGTAGATTATGTCAAAAAATTTCAAATTATCTTAGAACAATTTATTGAAT
ATTCGTTAAACAAAGAGAAACATAAAACGGAGTAA

Upstream 100 bases:

>100_bases
TTTCCTTAAACAATGAAATCGTTGTCAAATTGAGTGCTGCTTATTCAAATAAATGCTATGAGTGAAAATTAGGCCATAAT
AACTCGATTTTAGGATTAGG

Downstream 100 bases:

>100_bases
ACAGAAAGAGAGCGTGTTTCCCTTTCTTTGCCTAATTACACCTTTATGTTACATTAAATTCTTTATGGCATTCTATTGAT
TCACAAAAATAGTAGTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MIKDLLDQFIDLYEQESKTEALRLILPSPMIAYDDLFSKDRVFFYFVNFVDAAVFKGALEFKATFLVLESLCQEYPSLKF
LGERFLECIRLEYDLFTFFSNPSSLDEHCPPQLKTFFQWIHKGILSQEFPLEELLKSFPLQIQTLFSKKLVVLKGWERLK
QVKSTFIQSLGENLTVYKQPWHCFSYSLKINPKQKNISGWPLIFLEPVEGFDYHSFLQTYCSKKCLIIFPTVSHLFQILQ
FEDIHEIFMREHVYLYVLDIYPHQQFLSQHLLWEQNDSFDLIEMVPNPQIEKFFPALEIALKACLIQSKELLKRDTEQGN
GLYALGKKFVFDMESHRYGTNRAVALGIEQGLRQWYDPHKGAIPLGADLGPLTRNYLQEVIQERMTQRKVKKFQPNQKIK
LAHIVPQIVDGGHAPSKLLTTICTFTDQKWFNLSIFSTERLAEHLLSYPINSYHSGSSVIRGNLTLNHFKQLGVKVAIDP
DSPTYELTVKEALDFLEQQSIDVVIFHGPDELNSLISSSTSVPIRVLFDHGTLPLFPCFDLVILSTEEAYVQNREKFRLQ
GMESCVLPFSINVRQGWNEKPFSKEELGLPKDSFVLTTISHHLDTRVSEEMLHAIAKILKKCPKAIYAPIGEVTKQEKWK
EILDQYGVKDKLFFLGTHSNPSQYARSMELYLNEFPFGSGLALLDAMAAGCPVVSMYEENGPQQARYAATYFGIDYVVKT
GRVDDYIELACRLIENPVLYREWSVHALNQYEKRVDTVDYVKKFQIILEQFIEYSLNKEKHKTE

Sequences:

>Translated_784_residues
MIKDLLDQFIDLYEQESKTEALRLILPSPMIAYDDLFSKDRVFFYFVNFVDAAVFKGALEFKATFLVLESLCQEYPSLKF
LGERFLECIRLEYDLFTFFSNPSSLDEHCPPQLKTFFQWIHKGILSQEFPLEELLKSFPLQIQTLFSKKLVVLKGWERLK
QVKSTFIQSLGENLTVYKQPWHCFSYSLKINPKQKNISGWPLIFLEPVEGFDYHSFLQTYCSKKCLIIFPTVSHLFQILQ
FEDIHEIFMREHVYLYVLDIYPHQQFLSQHLLWEQNDSFDLIEMVPNPQIEKFFPALEIALKACLIQSKELLKRDTEQGN
GLYALGKKFVFDMESHRYGTNRAVALGIEQGLRQWYDPHKGAIPLGADLGPLTRNYLQEVIQERMTQRKVKKFQPNQKIK
LAHIVPQIVDGGHAPSKLLTTICTFTDQKWFNLSIFSTERLAEHLLSYPINSYHSGSSVIRGNLTLNHFKQLGVKVAIDP
DSPTYELTVKEALDFLEQQSIDVVIFHGPDELNSLISSSTSVPIRVLFDHGTLPLFPCFDLVILSTEEAYVQNREKFRLQ
GMESCVLPFSINVRQGWNEKPFSKEELGLPKDSFVLTTISHHLDTRVSEEMLHAIAKILKKCPKAIYAPIGEVTKQEKWK
EILDQYGVKDKLFFLGTHSNPSQYARSMELYLNEFPFGSGLALLDAMAAGCPVVSMYEENGPQQARYAATYFGIDYVVKT
GRVDDYIELACRLIENPVLYREWSVHALNQYEKRVDTVDYVKKFQIILEQFIEYSLNKEKHKTE
>Mature_784_residues
MIKDLLDQFIDLYEQESKTEALRLILPSPMIAYDDLFSKDRVFFYFVNFVDAAVFKGALEFKATFLVLESLCQEYPSLKF
LGERFLECIRLEYDLFTFFSNPSSLDEHCPPQLKTFFQWIHKGILSQEFPLEELLKSFPLQIQTLFSKKLVVLKGWERLK
QVKSTFIQSLGENLTVYKQPWHCFSYSLKINPKQKNISGWPLIFLEPVEGFDYHSFLQTYCSKKCLIIFPTVSHLFQILQ
FEDIHEIFMREHVYLYVLDIYPHQQFLSQHLLWEQNDSFDLIEMVPNPQIEKFFPALEIALKACLIQSKELLKRDTEQGN
GLYALGKKFVFDMESHRYGTNRAVALGIEQGLRQWYDPHKGAIPLGADLGPLTRNYLQEVIQERMTQRKVKKFQPNQKIK
LAHIVPQIVDGGHAPSKLLTTICTFTDQKWFNLSIFSTERLAEHLLSYPINSYHSGSSVIRGNLTLNHFKQLGVKVAIDP
DSPTYELTVKEALDFLEQQSIDVVIFHGPDELNSLISSSTSVPIRVLFDHGTLPLFPCFDLVILSTEEAYVQNREKFRLQ
GMESCVLPFSINVRQGWNEKPFSKEELGLPKDSFVLTTISHHLDTRVSEEMLHAIAKILKKCPKAIYAPIGEVTKQEKWK
EILDQYGVKDKLFFLGTHSNPSQYARSMELYLNEFPFGSGLALLDAMAAGCPVVSMYEENGPQQARYAATYFGIDYVVKT
GRVDDYIELACRLIENPVLYREWSVHALNQYEKRVDTVDYVKKFQIILEQFIEYSLNKEKHKTE

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90897; Mature: 90897

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDLLDQFIDLYEQESKTEALRLILPSPMIAYDDLFSKDRVFFYFVNFVDAAVFKGALE
CHHHHHHHHHHHHHHHCHHHHHHEECCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
FKATFLVLESLCQEYPSLKFLGERFLECIRLEYDLFTFFSNPSSLDEHCPPQLKTFFQWI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHH
HKGILSQEFPLEELLKSFPLQIQTLFSKKLVVLKGWERLKQVKSTFIQSLGENLTVYKQP
HHHHCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
WHCFSYSLKINPKQKNISGWPLIFLEPVEGFDYHSFLQTYCSKKCLIIFPTVSHLFQILQ
CEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHH
FEDIHEIFMREHVYLYVLDIYPHQQFLSQHLLWEQNDSFDLIEMVPNPQIEKFFPALEIA
HHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHH
LKACLIQSKELLKRDTEQGNGLYALGKKFVFDMESHRYGTNRAVALGIEQGLRQWYDPHK
HHHHHHHHHHHHHHHCCCCCCEEEECHHHHEECHHCCCCCCCEEEEEHHHHHHHHCCCCC
GAIPLGADLGPLTRNYLQEVIQERMTQRKVKKFQPNQKIKLAHIVPQIVDGGHAPSKLLT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHH
TICTFTDQKWFNLSIFSTERLAEHLLSYPINSYHSGSSVIRGNLTLNHFKQLGVKVAIDP
HHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHCCEEEEECC
DSPTYELTVKEALDFLEQQSIDVVIFHGPDELNSLISSSTSVPIRVLFDHGTLPLFPCFD
CCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
LVILSTEEAYVQNREKFRLQGMESCVLPFSINVRQGWNEKPFSKEELGLPKDSFVLTTIS
HHEECCHHHHHHCHHHHHHCCCCCEECEEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHH
HHLDTRVSEEMLHAIAKILKKCPKAIYAPIGEVTKQEKWKEILDQYGVKDKLFFLGTHSN
HHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PSQYARSMELYLNEFPFGSGLALLDAMAAGCPVVSMYEENGPQQARYAATYFGIDYVVKT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHEEC
GRVDDYIELACRLIENPVLYREWSVHALNQYEKRVDTVDYVKKFQIILEQFIEYSLNKEK
CCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HKTE
CCCC
>Mature Secondary Structure
MIKDLLDQFIDLYEQESKTEALRLILPSPMIAYDDLFSKDRVFFYFVNFVDAAVFKGALE
CHHHHHHHHHHHHHHHCHHHHHHEECCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
FKATFLVLESLCQEYPSLKFLGERFLECIRLEYDLFTFFSNPSSLDEHCPPQLKTFFQWI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHH
HKGILSQEFPLEELLKSFPLQIQTLFSKKLVVLKGWERLKQVKSTFIQSLGENLTVYKQP
HHHHCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
WHCFSYSLKINPKQKNISGWPLIFLEPVEGFDYHSFLQTYCSKKCLIIFPTVSHLFQILQ
CEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHH
FEDIHEIFMREHVYLYVLDIYPHQQFLSQHLLWEQNDSFDLIEMVPNPQIEKFFPALEIA
HHHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHH
LKACLIQSKELLKRDTEQGNGLYALGKKFVFDMESHRYGTNRAVALGIEQGLRQWYDPHK
HHHHHHHHHHHHHHHCCCCCCEEEECHHHHEECHHCCCCCCCEEEEEHHHHHHHHCCCCC
GAIPLGADLGPLTRNYLQEVIQERMTQRKVKKFQPNQKIKLAHIVPQIVDGGHAPSKLLT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHH
TICTFTDQKWFNLSIFSTERLAEHLLSYPINSYHSGSSVIRGNLTLNHFKQLGVKVAIDP
HHHHHCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHCCEEEEECC
DSPTYELTVKEALDFLEQQSIDVVIFHGPDELNSLISSSTSVPIRVLFDHGTLPLFPCFD
CCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
LVILSTEEAYVQNREKFRLQGMESCVLPFSINVRQGWNEKPFSKEELGLPKDSFVLTTIS
HHEECCHHHHHHCHHHHHHCCCCCEECEEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHH
HHLDTRVSEEMLHAIAKILKKCPKAIYAPIGEVTKQEKWKEILDQYGVKDKLFFLGTHSN
HHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PSQYARSMELYLNEFPFGSGLALLDAMAAGCPVVSMYEENGPQQARYAATYFGIDYVVKT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHEEC
GRVDDYIELACRLIENPVLYREWSVHALNQYEKRVDTVDYVKKFQIILEQFIEYSLNKEK
CCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HKTE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA