Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447571

Identifier: 46447571

GI number: 46447571

Start: 2305622

End: 2306311

Strand: Direct

Name: 46447571

Synonym: pc1937

Alternate gene names: NA

Gene position: 2305622-2306311 (Clockwise)

Preceding gene: 46447567

Following gene: 46447574

Centisome position: 95.49

GC content: 38.26

Gene sequence:

>690_bases
ATGGGTGATCTTTGGAAACCTTCTAAGCTTAATACTGCTGTTCTATCTCTTACGATCTGTATTTTTACACTTAGTACCGT
AGCTCCTCTGGGTGCTGACCCACAACAAGTTAATTTCAACCTTAATGATATTGGCTTTGCCTTACGCATCGAAAAGCTTG
TTGAGAAGTTGAATCATTACCGCAAAAAGGGCGATAGCAAAAAGCTCATGGAAACCATGTTCGATATGAAAGCTGAAGTC
GAGGGCTACACTGGCCAGAAAATTAATCTTGATAAGACTATTGATCAGATAGAACAACGAGTCAAAAATCAAGGTGGAAA
GGTCGACAAAAAGGTTATCAAAGAGCTCAAGAAAGACTTTAAAAAACAGGAAAAAAGAACTAACCATAAAGCCCTCTATA
TGGCTAACTGTATGGAATTTGATTTACCTTACCACGCCGAAGATGAACAACTTCTCTTTGATAATCATATCAACCTGGCT
AAGCATAGTCATGGTGACAAAGGTGATGAGATATGTGTGCCATTACGTGTCACTATCGGCATTACAGTAACTCTTTGCGG
TCTATTCCTTTTGTTCGTTCCAATTCCAATATGCAAACAATATGCCCCTTATGTTATCGAAACTGGACTTGCTTTCTTAG
TTGATGAAGGAATCACTCAATGGGAAGATAAAGACAAGGATAAAAAATGA

Upstream 100 bases:

>100_bases
TCATTGCTTTCACTTTTTCATTCACCTGGTGGCATAGGCTATTCACTGAACTTGACTACTTTCAAATCGACTACACAAAA
GAAACAAAAAAAAGGATGTT

Downstream 100 bases:

>100_bases
AAGAAAACAAAATATATTCCATAAATGGGATTTTTTTTAGGTAAAGGATATGATTATGGAAATTCTAGCAACTTTGAATC
AGTAAATTGAGGCAGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGDLWKPSKLNTAVLSLTICIFTLSTVAPLGADPQQVNFNLNDIGFALRIEKLVEKLNHYRKKGDSKKLMETMFDMKAEV
EGYTGQKINLDKTIDQIEQRVKNQGGKVDKKVIKELKKDFKKQEKRTNHKALYMANCMEFDLPYHAEDEQLLFDNHINLA
KHSHGDKGDEICVPLRVTIGITVTLCGLFLLFVPIPICKQYAPYVIETGLAFLVDEGITQWEDKDKDKK

Sequences:

>Translated_229_residues
MGDLWKPSKLNTAVLSLTICIFTLSTVAPLGADPQQVNFNLNDIGFALRIEKLVEKLNHYRKKGDSKKLMETMFDMKAEV
EGYTGQKINLDKTIDQIEQRVKNQGGKVDKKVIKELKKDFKKQEKRTNHKALYMANCMEFDLPYHAEDEQLLFDNHINLA
KHSHGDKGDEICVPLRVTIGITVTLCGLFLLFVPIPICKQYAPYVIETGLAFLVDEGITQWEDKDKDKK
>Mature_228_residues
GDLWKPSKLNTAVLSLTICIFTLSTVAPLGADPQQVNFNLNDIGFALRIEKLVEKLNHYRKKGDSKKLMETMFDMKAEVE
GYTGQKINLDKTIDQIEQRVKNQGGKVDKKVIKELKKDFKKQEKRTNHKALYMANCMEFDLPYHAEDEQLLFDNHINLAK
HSHGDKGDEICVPLRVTIGITVTLCGLFLLFVPIPICKQYAPYVIETGLAFLVDEGITQWEDKDKDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26145; Mature: 26014

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLWKPSKLNTAVLSLTICIFTLSTVAPLGADPQQVNFNLNDIGFALRIEKLVEKLNHY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHH
RKKGDSKKLMETMFDMKAEVEGYTGQKINLDKTIDQIEQRVKNQGGKVDKKVIKELKKDF
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KKQEKRTNHKALYMANCMEFDLPYHAEDEQLLFDNHINLAKHSHGDKGDEICVPLRVTIG
HHHHHHCCCCEEEEEHHHHCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCEEEEEEEHHH
ITVTLCGLFLLFVPIPICKQYAPYVIETGLAFLVDEGITQWEDKDKDKK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCC
>Mature Secondary Structure 
GDLWKPSKLNTAVLSLTICIFTLSTVAPLGADPQQVNFNLNDIGFALRIEKLVEKLNHY
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHH
RKKGDSKKLMETMFDMKAEVEGYTGQKINLDKTIDQIEQRVKNQGGKVDKKVIKELKKDF
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KKQEKRTNHKALYMANCMEFDLPYHAEDEQLLFDNHINLAKHSHGDKGDEICVPLRVTIG
HHHHHHCCCCEEEEEHHHHCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCEEEEEEEHHH
ITVTLCGLFLLFVPIPICKQYAPYVIETGLAFLVDEGITQWEDKDKDKK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA