Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447570

Identifier: 46447570

GI number: 46447570

Start: 2303617

End: 2304747

Strand: Reverse

Name: 46447570

Synonym: pc1936

Alternate gene names: NA

Gene position: 2304747-2303617 (Counterclockwise)

Preceding gene: 46447572

Following gene: 46447569

Centisome position: 95.46

GC content: 32.18

Gene sequence:

>1131_bases
GTGGTTTATACCATCAATATAATCGTTGAACAGGTGGGAAAAATTGCCATACAAGGCAATATTATTCCCAATGAGTGGTA
CGCTCATCTTCGCAATGAAAAAAGTAAAATTCAAACCAATGCTGCTTTAATCTTAGCTGACATTGTTTATTGGTACCGAC
CTATTCCCACTTACGATATTAAAACGAGCGAAATAGTAGGTTATGGAAAAAAGTTCAAAGATGATCTTTTACAGTTGAAT
TATAAATATTTTAATAAAAAGTTCGGTTTTAGCGAAATACAAAGCCGAAATGCTTTGATTTTCTTAGAAAATAAAGGGCT
TATTTTTCGAGAATTTTGCGCTACGAAAATAGGGCCTTACTTGCTTAATAATGTTATGTATATAGGAATTTATCCAGAAA
AGATTTCTTCCATTACTCAGCAGATTGATCAATTCTTATCATCTTCAATTTCAGAGATGCAAATTAATCCATCAACTCCA
CAAACTCCCTCCATTCAAACAGAATCTCCTCAATTTAAAACCAAAGAAAAAGATTGGTCTGTTAAATTTTCGGATGAACA
AAAAAGCTTTTTGAATTATTTGCTAAATATTCAGCCTGAAATGGGTGATCCCATTGAAAAGAACCATGCCACATGGTGGA
TTAAAAGTTTTGGGATCGAGAAAATCAAAACAGCTCTTCAAGTTTATTGGGAAAGAGTCGAAAGAGCTAAACTAGATCCT
ACTGTTCCTATGCCCCAACACATAGGCAAATACATGCGTACAGCTCTTAATGAAAACTTACGTCCCATGGGCTCGAATTC
TTGTACCCCCTATTTAGAAAAATCGAAACAGGTGTTCTCAAAAGTCGAACTAGGTGGTCATGAAAATGAGACGACATATA
CAAATATATCAATGACATCTATGTCTTTAAATGAGATCAATGATAGCAACAAATCACTGACCTATCAAAAAAATGAAGCT
TTAAAAACAAAGTCCTCAACCAAACAAAATTTTGTTAAATCACCTATTTCATTAAATAAATCTCTCCCTTCTATTGCTAA
AAATTTAAACAAAGAAAATTTTAAAAACCTGGATTGGAAAAAAACTTTTAATTCAGAACAAATTATTAAAAATAAAAGGA
GTGTTAATTAA

Upstream 100 bases:

>100_bases
CTTATATACAGTTCTGAGCATTTTTATTCTTATTAATTAAAAATTAAACACTTAAAAATACTTTGATTTTAACGTCTCCT
GCAACAAACAGGAGAATTTT

Downstream 100 bases:

>100_bases
TACTTTCATAGATTTTTGCCAGAACTCTTTTAAGTGAACCTAATATCAGAAGAGCATTATTAAAAAGAAAGCTTTCTTGC
TGAAAAATTTGGTTCAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage; Replication Protein Phage

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MVYTINIIVEQVGKIAIQGNIIPNEWYAHLRNEKSKIQTNAALILADIVYWYRPIPTYDIKTSEIVGYGKKFKDDLLQLN
YKYFNKKFGFSEIQSRNALIFLENKGLIFREFCATKIGPYLLNNVMYIGIYPEKISSITQQIDQFLSSSISEMQINPSTP
QTPSIQTESPQFKTKEKDWSVKFSDEQKSFLNYLLNIQPEMGDPIEKNHATWWIKSFGIEKIKTALQVYWERVERAKLDP
TVPMPQHIGKYMRTALNENLRPMGSNSCTPYLEKSKQVFSKVELGGHENETTYTNISMTSMSLNEINDSNKSLTYQKNEA
LKTKSSTKQNFVKSPISLNKSLPSIAKNLNKENFKNLDWKKTFNSEQIIKNKRSVN

Sequences:

>Translated_376_residues
MVYTINIIVEQVGKIAIQGNIIPNEWYAHLRNEKSKIQTNAALILADIVYWYRPIPTYDIKTSEIVGYGKKFKDDLLQLN
YKYFNKKFGFSEIQSRNALIFLENKGLIFREFCATKIGPYLLNNVMYIGIYPEKISSITQQIDQFLSSSISEMQINPSTP
QTPSIQTESPQFKTKEKDWSVKFSDEQKSFLNYLLNIQPEMGDPIEKNHATWWIKSFGIEKIKTALQVYWERVERAKLDP
TVPMPQHIGKYMRTALNENLRPMGSNSCTPYLEKSKQVFSKVELGGHENETTYTNISMTSMSLNEINDSNKSLTYQKNEA
LKTKSSTKQNFVKSPISLNKSLPSIAKNLNKENFKNLDWKKTFNSEQIIKNKRSVN
>Mature_376_residues
MVYTINIIVEQVGKIAIQGNIIPNEWYAHLRNEKSKIQTNAALILADIVYWYRPIPTYDIKTSEIVGYGKKFKDDLLQLN
YKYFNKKFGFSEIQSRNALIFLENKGLIFREFCATKIGPYLLNNVMYIGIYPEKISSITQQIDQFLSSSISEMQINPSTP
QTPSIQTESPQFKTKEKDWSVKFSDEQKSFLNYLLNIQPEMGDPIEKNHATWWIKSFGIEKIKTALQVYWERVERAKLDP
TVPMPQHIGKYMRTALNENLRPMGSNSCTPYLEKSKQVFSKVELGGHENETTYTNISMTSMSLNEINDSNKSLTYQKNEA
LKTKSSTKQNFVKSPISLNKSLPSIAKNLNKENFKNLDWKKTFNSEQIIKNKRSVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43498; Mature: 43498

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYTINIIVEQVGKIAIQGNIIPNEWYAHLRNEKSKIQTNAALILADIVYWYRPIPTYDI
CEEEEEEHHHHHCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTSEIVGYGKKFKDDLLQLNYKYFNKKFGFSEIQSRNALIFLENKGLIFREFCATKIGPY
CHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
LLNNVMYIGIYPEKISSITQQIDQFLSSSISEMQINPSTPQTPSIQTESPQFKTKEKDWS
HHCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCE
VKFSDEQKSFLNYLLNIQPEMGDPIEKNHATWWIKSFGIEKIKTALQVYWERVERAKLDP
EEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCC
TVPMPQHIGKYMRTALNENLRPMGSNSCTPYLEKSKQVFSKVELGGHENETTYTNISMTS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
MSLNEINDSNKSLTYQKNEALKTKSSTKQNFVKSPISLNKSLPSIAKNLNKENFKNLDWK
EEHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCHHHCCCCCHH
KTFNSEQIIKNKRSVN
HCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVYTINIIVEQVGKIAIQGNIIPNEWYAHLRNEKSKIQTNAALILADIVYWYRPIPTYDI
CEEEEEEHHHHHCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTSEIVGYGKKFKDDLLQLNYKYFNKKFGFSEIQSRNALIFLENKGLIFREFCATKIGPY
CHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
LLNNVMYIGIYPEKISSITQQIDQFLSSSISEMQINPSTPQTPSIQTESPQFKTKEKDWS
HHCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCE
VKFSDEQKSFLNYLLNIQPEMGDPIEKNHATWWIKSFGIEKIKTALQVYWERVERAKLDP
EEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCC
TVPMPQHIGKYMRTALNENLRPMGSNSCTPYLEKSKQVFSKVELGGHENETTYTNISMTS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
MSLNEINDSNKSLTYQKNEALKTKSSTKQNFVKSPISLNKSLPSIAKNLNKENFKNLDWK
EEHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCHHHCCCCCHH
KTFNSEQIIKNKRSVN
HCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA