Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447544

Identifier: 46447544

GI number: 46447544

Start: 2271281

End: 2272237

Strand: Direct

Name: 46447544

Synonym: pc1910

Alternate gene names: NA

Gene position: 2271281-2272237 (Clockwise)

Preceding gene: 46447543

Following gene: 46447545

Centisome position: 94.07

GC content: 36.78

Gene sequence:

>957_bases
ATGATGATCTATCAAGAAGGAATTTTTTCACCTACAGGGCTGCCTTTACAAGATAAACTTTTAGCCATACAGACACGAAA
AAAAGCAACACAAGAAAATTTTTTGAAAACTCAACAATCTGATGAAGAAAATCTTCGTTTAGGAAATTTTATCTTAGAGC
AAGCAAAAGAAGCAATGCATGCATTCATCCGCATTGAGGAAGAACAAAAAATTCAAATTTTATCCGTACAGAGGGCATCT
GCTGATCTTAACAATTTGCAGCAAAGCATAGATGCAGTCGCGGCTAACCAAATCCAGCTTTCGCAAACCCTTCCAGGAAT
TGAGAAATCATTTTTAGAGTTGACTTCGAATTTAAATGAGCAACAAGCGGAACTTTCAATAATTGCTGAAGATTTCGCTC
AAATACGAGAAAGTCAGCAAAAAATGACTACTCAATCTCATCTCTTAAATGAACAAGTTCAACTTGTTAAACAAGAAATG
GAACAGTTATCTATCGAAGTGGGGCAAAAAATAAATGTATTTTCACCTTACCTAGTTAAGAAAATCCATAGAGTGTATAC
GGGAAGTCTAAATCGGCTTCATGACTTGAAAGCGGCAATGAAAAATAAACAAGAAGAGATAAAGTTGAGGGTTAAAGCGC
TTTCGTTGCATTCTTGGACTAATATTACCGCCATTGCTTCTCAAACAATCGAATGGACTAAAGGTAGTATTTCAAGTGTG
GGAGAAATGAAAAGCACCCTGACAAACCTAGGCAAATGGGGATATACATTGCTTGCTAAAAGTGCCAATCTTACCTATTG
GGTGGTACTAGGCATCATGACTGTTTTGATGGCTCAGTCATTTATTTATCATTATCCTTTGATAAGCCTGGCTCTGGGCG
GATCTATTGCCGTTATTCATATAAAATACAATCTCATCCAACCAATCATGCGTTCTTTGGGCACGTTAATAGAATGA

Upstream 100 bases:

>100_bases
ATTTTAGCTGGCGTACTTTTACTAAGTATAATAGTTTGTTTATGAATCATGTTGTATATAGCAAACCCACCCGTAGAAAG
TCAACACAGGGAACAAACTT

Downstream 100 bases:

>100_bases
TGATATTAAAGATAGCTAAAACAAAAATTTTCTAATTTTATTAAGCTAAGTCGTCAATCAATAGATATACGACTGTATAT
TATTTAATTTGAGTGAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS
ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM
EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV
GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE

Sequences:

>Translated_318_residues
MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS
ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM
EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV
GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE
>Mature_318_residues
MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS
ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM
EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV
GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35939; Mature: 35939

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMH
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFIRIEEEQKIQILSVQRASADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNE
HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHCCCH
QQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEMEQLSIEVGQKINVFSPYLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
KIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IKYNLIQPIMRSLGTLIE
EEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMH
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AFIRIEEEQKIQILSVQRASADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNE
HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHCCCH
QQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEMEQLSIEVGQKINVFSPYLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
KIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV
HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IKYNLIQPIMRSLGTLIE
EEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA