| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447544
Identifier: 46447544
GI number: 46447544
Start: 2271281
End: 2272237
Strand: Direct
Name: 46447544
Synonym: pc1910
Alternate gene names: NA
Gene position: 2271281-2272237 (Clockwise)
Preceding gene: 46447543
Following gene: 46447545
Centisome position: 94.07
GC content: 36.78
Gene sequence:
>957_bases ATGATGATCTATCAAGAAGGAATTTTTTCACCTACAGGGCTGCCTTTACAAGATAAACTTTTAGCCATACAGACACGAAA AAAAGCAACACAAGAAAATTTTTTGAAAACTCAACAATCTGATGAAGAAAATCTTCGTTTAGGAAATTTTATCTTAGAGC AAGCAAAAGAAGCAATGCATGCATTCATCCGCATTGAGGAAGAACAAAAAATTCAAATTTTATCCGTACAGAGGGCATCT GCTGATCTTAACAATTTGCAGCAAAGCATAGATGCAGTCGCGGCTAACCAAATCCAGCTTTCGCAAACCCTTCCAGGAAT TGAGAAATCATTTTTAGAGTTGACTTCGAATTTAAATGAGCAACAAGCGGAACTTTCAATAATTGCTGAAGATTTCGCTC AAATACGAGAAAGTCAGCAAAAAATGACTACTCAATCTCATCTCTTAAATGAACAAGTTCAACTTGTTAAACAAGAAATG GAACAGTTATCTATCGAAGTGGGGCAAAAAATAAATGTATTTTCACCTTACCTAGTTAAGAAAATCCATAGAGTGTATAC GGGAAGTCTAAATCGGCTTCATGACTTGAAAGCGGCAATGAAAAATAAACAAGAAGAGATAAAGTTGAGGGTTAAAGCGC TTTCGTTGCATTCTTGGACTAATATTACCGCCATTGCTTCTCAAACAATCGAATGGACTAAAGGTAGTATTTCAAGTGTG GGAGAAATGAAAAGCACCCTGACAAACCTAGGCAAATGGGGATATACATTGCTTGCTAAAAGTGCCAATCTTACCTATTG GGTGGTACTAGGCATCATGACTGTTTTGATGGCTCAGTCATTTATTTATCATTATCCTTTGATAAGCCTGGCTCTGGGCG GATCTATTGCCGTTATTCATATAAAATACAATCTCATCCAACCAATCATGCGTTCTTTGGGCACGTTAATAGAATGA
Upstream 100 bases:
>100_bases ATTTTAGCTGGCGTACTTTTACTAAGTATAATAGTTTGTTTATGAATCATGTTGTATATAGCAAACCCACCCGTAGAAAG TCAACACAGGGAACAAACTT
Downstream 100 bases:
>100_bases TGATATTAAAGATAGCTAAAACAAAAATTTTCTAATTTTATTAAGCTAAGTCGTCAATCAATAGATATACGACTGTATAT TATTTAATTTGAGTGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE
Sequences:
>Translated_318_residues MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE >Mature_318_residues MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMHAFIRIEEEQKIQILSVQRAS ADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNEQQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEM EQLSIEVGQKINVFSPYLVKKIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIHIKYNLIQPIMRSLGTLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35939; Mature: 35939
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMH CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AFIRIEEEQKIQILSVQRASADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNE HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHCCCH QQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEMEQLSIEVGQKINVFSPYLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH KIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IKYNLIQPIMRSLGTLIE EEHHHHHHHHHHHHHHCC >Mature Secondary Structure MMIYQEGIFSPTGLPLQDKLLAIQTRKKATQENFLKTQQSDEENLRLGNFILEQAKEAMH CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AFIRIEEEQKIQILSVQRASADLNNLQQSIDAVAANQIQLSQTLPGIEKSFLELTSNLNE HHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHCCCH QQAELSIIAEDFAQIRESQQKMTTQSHLLNEQVQLVKQEMEQLSIEVGQKINVFSPYLVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH KIHRVYTGSLNRLHDLKAAMKNKQEEIKLRVKALSLHSWTNITAIASQTIEWTKGSISSV HHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH GEMKSTLTNLGKWGYTLLAKSANLTYWVVLGIMTVLMAQSFIYHYPLISLALGGSIAVIH HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IKYNLIQPIMRSLGTLIE EEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA