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The map label for this gene is 46447540

Identifier: 46447540

GI number: 46447540

Start: 2268698

End: 2269183

Strand: Reverse

Name: 46447540

Synonym: pc1906

Alternate gene names: NA

Gene position: 2269183-2268698 (Counterclockwise)

Preceding gene: 46447546

Following gene: 46447538

Centisome position: 93.98

GC content: 37.45

Gene sequence:

>486_bases
GTGCAATCCTTTAAAACAAATGTCATTTGGAGCACGCTAGATCGATTTATGGTAGAAGGAGTTATTGGAGTTTGGTTAGG
AACCTTGAATCGTTCGACTCAGATTAACTATCATTCCGGTATGAAGCAACTAGCGCAGCAAGGCCTGATTAATTTAAGGA
TCAGTTTGCAAGCTTTTTCTTTTGTCAATCACGAAGCAATTTTGGATCAAATAAAATTAGTTCAGGATTGGTCTGAAGAC
ACAAGACAGACAAGAGCTGCTTGCTATGTGTCTTTTACAGATTATTTGAACAGGCAATTGCAAGGAGTTGTGCTAAAGGC
CATACAAAGCAAAGAAAAGGAAACAAAACGTTTTTCAAAATACAGGAAAAAGATGGTTACAGAGGCCATGAATCAAGCAC
ATTGGCGACTTTTTTATGGAAGACAAGCCATAACCACTGATCATTTTTCTTATTTCCTACAAAGCTCTATTGCTCATCTC
CTTTAA

Upstream 100 bases:

>100_bases
CAGTTATAAATAAATTTATCCTTTTGAGACAATTTTTATGATAGTCTTGCCCACGTCTAGTGATTTGGAAATTCCAATTA
ACAATGAATCCTACGAATAA

Downstream 100 bases:

>100_bases
GTTTAGTTACTTTTAATTCATCTTTCTCATGACAAGTGACTTATGCATTTAAATCCTCAGGTAAATCATTGATAATGAAA
TCAATAAAATCATAGCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQSFKTNVIWSTLDRFMVEGVIGVWLGTLNRSTQINYHSGMKQLAQQGLINLRISLQAFSFVNHEAILDQIKLVQDWSED
TRQTRAACYVSFTDYLNRQLQGVVLKAIQSKEKETKRFSKYRKKMVTEAMNQAHWRLFYGRQAITTDHFSYFLQSSIAHL
L

Sequences:

>Translated_161_residues
MQSFKTNVIWSTLDRFMVEGVIGVWLGTLNRSTQINYHSGMKQLAQQGLINLRISLQAFSFVNHEAILDQIKLVQDWSED
TRQTRAACYVSFTDYLNRQLQGVVLKAIQSKEKETKRFSKYRKKMVTEAMNQAHWRLFYGRQAITTDHFSYFLQSSIAHL
L
>Mature_161_residues
MQSFKTNVIWSTLDRFMVEGVIGVWLGTLNRSTQINYHSGMKQLAQQGLINLRISLQAFSFVNHEAILDQIKLVQDWSED
TRQTRAACYVSFTDYLNRQLQGVVLKAIQSKEKETKRFSKYRKKMVTEAMNQAHWRLFYGRQAITTDHFSYFLQSSIAHL
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 18829; Mature: 18829

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFKTNVIWSTLDRFMVEGVIGVWLGTLNRSTQINYHSGMKQLAQQGLINLRISLQAFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHEEHHHHHHH
FVNHEAILDQIKLVQDWSEDTRQTRAACYVSFTDYLNRQLQGVVLKAIQSKEKETKRFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRKKMVTEAMNQAHWRLFYGRQAITTDHFSYFLQSSIAHLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQSFKTNVIWSTLDRFMVEGVIGVWLGTLNRSTQINYHSGMKQLAQQGLINLRISLQAFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHEEHHHHHHH
FVNHEAILDQIKLVQDWSEDTRQTRAACYVSFTDYLNRQLQGVVLKAIQSKEKETKRFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRKKMVTEAMNQAHWRLFYGRQAITTDHFSYFLQSSIAHLL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202459 [H]