| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447505
Identifier: 46447505
GI number: 46447505
Start: 2231394
End: 2231885
Strand: Direct
Name: 46447505
Synonym: pc1871
Alternate gene names: NA
Gene position: 2231394-2231885 (Clockwise)
Preceding gene: 46447504
Following gene: 46447506
Centisome position: 92.42
GC content: 27.24
Gene sequence:
>492_bases ATGAACTTTAATTTAAATAATGTAACAAACTTAATTGAATTATTTTCTATTGTAAAAAATGCTAAAGAAAATATTTCTTT TTGGGGATATCGTTATATCTATATAGTGGGCTATGAAAATACATTACCAATTGATGCTTTGGCATCAAAACTCATGGAGT TAGTTAGAGTGGATTTTGATTTTAGTGAGGACGAACGATTAATTGGCAAATCTATAACTCCTATTATTGAGAATCTTTAT GAACAAAATAAAAAAAGGATTAATGATAAAAATTGGTTTACTCAAATTATTTGCAAAATAAGAGATCTTTGGAAATTTAA TAAAGAAGGTGGATACGGAATCAAATTTGAATGGGATAATTATTTTTGGAAAGACACTTTTGATTATTATACAGAACATC AATACAAAAAAATATTTAACAAATATCCTATTCGATGTACAGATTGGCATGATGCTTATACAGGTCCAAATAGATGGCTT GCACCAGCTTGA
Upstream 100 bases:
>100_bases CTTTACAGAGATTATAAATTAGTTTATTTTAAAAACAATTAAAAATAAAATAAATAATTTTTAATTATTTAATATTTAAA TTTAAATAAATGAGGATTAA
Downstream 100 bases:
>100_bases AAATTTGTCAGGTAATAAGAAGAATCAAAGTTAGATGATAACCTATATAGTTAGAATTTCAAACATCAATCAATAGAACG TATTCAAAATTATAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNFNLNNVTNLIELFSIVKNAKENISFWGYRYIYIVGYENTLPIDALASKLMELVRVDFDFSEDERLIGKSITPIIENLY EQNKKRINDKNWFTQIICKIRDLWKFNKEGGYGIKFEWDNYFWKDTFDYYTEHQYKKIFNKYPIRCTDWHDAYTGPNRWL APA
Sequences:
>Translated_163_residues MNFNLNNVTNLIELFSIVKNAKENISFWGYRYIYIVGYENTLPIDALASKLMELVRVDFDFSEDERLIGKSITPIIENLY EQNKKRINDKNWFTQIICKIRDLWKFNKEGGYGIKFEWDNYFWKDTFDYYTEHQYKKIFNKYPIRCTDWHDAYTGPNRWL APA >Mature_163_residues MNFNLNNVTNLIELFSIVKNAKENISFWGYRYIYIVGYENTLPIDALASKLMELVRVDFDFSEDERLIGKSITPIIENLY EQNKKRINDKNWFTQIICKIRDLWKFNKEGGYGIKFEWDNYFWKDTFDYYTEHQYKKIFNKYPIRCTDWHDAYTGPNRWL APA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19774; Mature: 19774
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNLNNVTNLIELFSIVKNAKENISFWGYRYIYIVGYENTLPIDALASKLMELVRVDFD CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC FSEDERLIGKSITPIIENLYEQNKKRINDKNWFTQIICKIRDLWKFNKEGGYGIKFEWDN CCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC YFWKDTFDYYTEHQYKKIFNKYPIRCTDWHDAYTGPNRWLAPA CEECCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFNLNNVTNLIELFSIVKNAKENISFWGYRYIYIVGYENTLPIDALASKLMELVRVDFD CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC FSEDERLIGKSITPIIENLYEQNKKRINDKNWFTQIICKIRDLWKFNKEGGYGIKFEWDN CCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC YFWKDTFDYYTEHQYKKIFNKYPIRCTDWHDAYTGPNRWLAPA CEECCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA