| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447496
Identifier: 46447496
GI number: 46447496
Start: 2223109
End: 2223603
Strand: Direct
Name: 46447496
Synonym: pc1862
Alternate gene names: NA
Gene position: 2223109-2223603 (Clockwise)
Preceding gene: 46447494
Following gene: 46447497
Centisome position: 92.07
GC content: 34.55
Gene sequence:
>495_bases ATGAAAATTAAAAATTTAGCAAAAGTTGTTTTTGCAACACTTTTATTAGCCTCTGTTCAATCCATTAATGCACAAGCAAC TTGTAAACAAGCTTCAAGCTATTCTCCCAACTTAAGCAAGGAAGATTGTGGCAGTCAAGTAAGTTTTGATTCTCAATCCC ATTCTACTCGGAGTGATTTAGCTGATAATTATTCGTATGGATGTGACAATAGCCTTTACTCTTATAAAGAACATTCTAGA GGGTCTGAAACTAGCTATTCTTGTCGTTCAAAACAAAGTTCTGACAGAATGAACCGTTCTAATAGATATTATAATACAAG TTTTAATGTAGGGAATTATCCCTCTGGGATAAGCAGCTATTCGGGAACAAGTACCGGCTCTGGAATTAGCAATGGATATC ATAGCACCCCTAATGGCACTTATAAAACTGATCGTCGGTATTATGATCGAAATATCAAAGCTAATTTAGATGCTTATCAT CAAATAAAGAGATAA
Upstream 100 bases:
>100_bases TGATGATGGACAAAAAATTCTTATTGCTTTTATGGTCAGGTTAAATTCAAAAAATTACTTAGTGAATTATCCTCTCTTTT AATTATACCATAGAGGCTTT
Downstream 100 bases:
>100_bases GAGAACAAAAATATTAACCTTTTGGAGGAAAAAATGGAAAACAAGAAAAAACAATTAGTGAAAGCCGCTTTTGCAGCTTT AGTATTAGCATCTAGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKIKNLAKVVFATLLLASVQSINAQATCKQASSYSPNLSKEDCGSQVSFDSQSHSTRSDLADNYSYGCDNSLYSYKEHSR GSETSYSCRSKQSSDRMNRSNRYYNTSFNVGNYPSGISSYSGTSTGSGISNGYHSTPNGTYKTDRRYYDRNIKANLDAYH QIKR
Sequences:
>Translated_164_residues MKIKNLAKVVFATLLLASVQSINAQATCKQASSYSPNLSKEDCGSQVSFDSQSHSTRSDLADNYSYGCDNSLYSYKEHSR GSETSYSCRSKQSSDRMNRSNRYYNTSFNVGNYPSGISSYSGTSTGSGISNGYHSTPNGTYKTDRRYYDRNIKANLDAYH QIKR >Mature_164_residues MKIKNLAKVVFATLLLASVQSINAQATCKQASSYSPNLSKEDCGSQVSFDSQSHSTRSDLADNYSYGCDNSLYSYKEHSR GSETSYSCRSKQSSDRMNRSNRYYNTSFNVGNYPSGISSYSGTSTGSGISNGYHSTPNGTYKTDRRYYDRNIKANLDAYH QIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18271; Mature: 18271
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKNLAKVVFATLLLASVQSINAQATCKQASSYSPNLSKEDCGSQVSFDSQSHSTRSDL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHH ADNYSYGCDNSLYSYKEHSRGSETSYSCRSKQSSDRMNRSNRYYNTSFNVGNYPSGISSY HHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC SGTSTGSGISNGYHSTPNGTYKTDRRYYDRNIKANLDAYHQIKR CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure MKIKNLAKVVFATLLLASVQSINAQATCKQASSYSPNLSKEDCGSQVSFDSQSHSTRSDL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHH ADNYSYGCDNSLYSYKEHSRGSETSYSCRSKQSSDRMNRSNRYYNTSFNVGNYPSGISSY HHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC SGTSTGSGISNGYHSTPNGTYKTDRRYYDRNIKANLDAYHQIKR CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA