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The map label for this gene is pal [H]

Identifier: 46447485

GI number: 46447485

Start: 2212004

End: 2212744

Strand: Direct

Name: pal [H]

Synonym: pc1851

Alternate gene names: 46447485

Gene position: 2212004-2212744 (Clockwise)

Preceding gene: 46447484

Following gene: 46447486

Centisome position: 91.61

GC content: 41.03

Gene sequence:

>741_bases
ATGAGAATATATTCTTTTTATTTAGTAGCCTTATTAGGGTCTGCCTGTCTACTTCAAAGTTGCGCAAGAAATGGTAGCGA
TGTTTGGGAAGATACAAAATCCGCTGGCCGGCACATGAACCGTGGTGTAAGGGCTCTTGGCGGCAAACATGGCGACTCTC
GCCAAGTTCATTCAAAAAACGATTTTGAATGCGTAGATGATGAGTATAGCCATCAAGAAGGAGGTTTTCAAGACTGTGAT
TATTCTCGCGCAGACTTCATTCCCTTACAAGATCAAGCCAACAATGAGTTTGCAATGGCAGATATCCTTGCTCGCCAACC
TCGAGAAACGCCTGGTGAAATAGGTAGTTCCATTCCGAGTATTGAATCTTTTCAAGATCCTTGCATGATTCCCCAACTCG
CAGCCATTTTTAAAACGATTTACTTCGATTATGATAGCAGTATGATTAAAGGTCAGGCAAATTTACAAACAATTCATCAA
ATTGCTGATTTCATGCGTCGCCATCCAAATGTTTATATTTTTATTGAAGGGCATACCGATGAAAGAGGACCTCAAGCTTA
TAACTTGGCTCTAGGTTCCCGTCGTAGCAATGCCGTTCGTAACCTTTTGATTAGTGAAGATGTTAATCCAGATAATCTCT
TTACCATTTCTTATGGGAAAGAACGACCCGTCGTCTTAGAAAAACATGAAGAAGGCTGGTCTAGAAACCGTCGCGTAGAG
TTCAAGATTTATGAACGTTAA

Upstream 100 bases:

>100_bases
ATTCAAAATTTTTTTTGCAAATAGAGTAAATTTCAAAAAGAAACCGTTTTTTCACTTACAAAACTTCAATGAGCTCTCTC
TAATTTCCGGAGAAAATCTT

Downstream 100 bases:

>100_bases
ATTTTCTTTCCTTATGGGAACACTAATCATGTTCCCACTTTTAAATTGCATGAGTGCAACTTATCCAAATTACTCGGCAC
ATTCTAACTTGCCTAATCAA

Product: peptidoglycan-associated lipoprotein precursor (pal)

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRIYSFYLVALLGSACLLQSCARNGSDVWEDTKSAGRHMNRGVRALGGKHGDSRQVHSKNDFECVDDEYSHQEGGFQDCD
YSRADFIPLQDQANNEFAMADILARQPRETPGEIGSSIPSIESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQ
IADFMRRHPNVYIFIEGHTDERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVE
FKIYER

Sequences:

>Translated_246_residues
MRIYSFYLVALLGSACLLQSCARNGSDVWEDTKSAGRHMNRGVRALGGKHGDSRQVHSKNDFECVDDEYSHQEGGFQDCD
YSRADFIPLQDQANNEFAMADILARQPRETPGEIGSSIPSIESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQ
IADFMRRHPNVYIFIEGHTDERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVE
FKIYER
>Mature_246_residues
MRIYSFYLVALLGSACLLQSCARNGSDVWEDTKSAGRHMNRGVRALGGKHGDSRQVHSKNDFECVDDEYSHQEGGFQDCD
YSRADFIPLQDQANNEFAMADILARQPRETPGEIGSSIPSIESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQ
IADFMRRHPNVYIFIEGHTDERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVE
FKIYER

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=100, Percent_Identity=42, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28076; Mature: 28076

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYSFYLVALLGSACLLQSCARNGSDVWEDTKSAGRHMNRGVRALGGKHGDSRQVHSKN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DFECVDDEYSHQEGGFQDCDYSRADFIPLQDQANNEFAMADILARQPRETPGEIGSSIPS
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCC
IESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQIADFMRRHPNVYIFIEGHTD
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
ERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVE
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEE
FKIYER
EEEECC
>Mature Secondary Structure
MRIYSFYLVALLGSACLLQSCARNGSDVWEDTKSAGRHMNRGVRALGGKHGDSRQVHSKN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DFECVDDEYSHQEGGFQDCDYSRADFIPLQDQANNEFAMADILARQPRETPGEIGSSIPS
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCC
IESFQDPCMIPQLAAIFKTIYFDYDSSMIKGQANLQTIHQIADFMRRHPNVYIFIEGHTD
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
ERGPQAYNLALGSRRSNAVRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVE
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEE
FKIYER
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]