Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447388

Identifier: 46447388

GI number: 46447388

Start: 2097638

End: 2098867

Strand: Direct

Name: 46447388

Synonym: pc1754

Alternate gene names: NA

Gene position: 2097638-2098867 (Clockwise)

Preceding gene: 46447387

Following gene: 46447389

Centisome position: 86.88

GC content: 34.96

Gene sequence:

>1230_bases
ATGGCAGCATCGGTAAAAAATATTCTAATAGGAATCTTCGTTCTTCTCGCTCTTGCCATTATTGTCTTCCTACTTCTTTT
TCTTCATCCTTCTGTCGGAGATAATGCAAAAACATTACGAGTTCGCTTTACCAATATTGATAAAATCAATGTTGGCTCGC
GTGTTACATTTGCCGGTAAACCTGTCGGAGAAGTTGTTTCAATTGAAGAGATACCTGATGCAAGAATCGGTCGAATCAAC
CATCAAGGTGACGTTTATATCTATCAACTAACTTTGAAAGTGGATTCTAGCGTGAGTGTCTATAATTCAGATGAAATTTC
TATTCGCACTTCCGGTTTATTGGGTGAAAAAAATATTGAAATCGATCCTCAGCCCCTTAAATCAGGTGGGACACTCATTG
ATGTCGAAAACCAAATTCTCTATGCTTCTCCTTCTGGATCTGTTGAAGAAACATTAAAACAATTTGATCAAATTTCCACG
CAACTCAAGGTCGTATTGGAAGACTTCCATGACACTTTTACAATTTTGAAAAATGAAAAAGTCATTGAAGGAATTGCTCA
AACAATAAAAAATATAGGGGAAATTACTCAGGTTGTAAATCAACCAGAAAAATTAAGCCGTATGCTTACTAACTTTGTTA
ATTTATCTGAACGAACCCACCAATCGTGGAAGACGTTAGATGCAGCCTGTCAAAATTTTTATCAACTCAGTGAGAAAGCT
AATATTTCCTGGTTGTCTGTTGAAAATACTTTAAAAGAATTCAATTTAGCGTCAGTCAATTTGCAAAAAATGACGAATCA
AACACAACTTTTAGTTGCAAATATGGCGCAAGGAAAAGGAACATTAGGTAAGCTATTCGTAGCAGATGATTTATATTTAC
GAGTTAAATCTATTTTAAATAAAGGTGAGAACATTTTTAGCGATATTAAGCAGTATGGAATTCTATTTCAACACAACAAA
CGGTGGCAACGTCTTCAAGCGCAACGAATGAAATTATTACATAAATTATCTGATTCAAACAAATTTGCTAATTATTTCAA
TGACGAAATCAATCAAATTTCATCTTCTCTTTCTAGTATTTCTATGGTATTAAACGAAGCAGAGTGTTATCCCTATTCAT
TATTAAATACCCCGGAATTCACCTGCCGGTTTGCGGACCTTATTAAGCGTGTGGGGGAAATGGAAAACGCATTAAAGATG
TATAATGAACAAGTCATCGACCAAGAGTAG

Upstream 100 bases:

>100_bases
TAAAAATCGATGATCCGCTCCTTAATGATTTTTTCAATAATGCGTTCATTGATAAAAAAATTTTTTATAAGCCAAAACAG
TCGGGAGATTCATAATTACT

Downstream 100 bases:

>100_bases
TTTTTAAGGAGTTAATCGGATGGAAAACATGCCTTATTCTCAAATCCAGAAAGGAACTTTTTTAATTGCCACTCCTGATA
TTGATTCAGGTTTTTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Mammalian Cell Entry Related Domain Protein

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MAASVKNILIGIFVLLALAIIVFLLLFLHPSVGDNAKTLRVRFTNIDKINVGSRVTFAGKPVGEVVSIEEIPDARIGRIN
HQGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEKNIEIDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQIST
QLKVVLEDFHDTFTILKNEKVIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKTLDAACQNFYQLSEKA
NISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGKLFVADDLYLRVKSILNKGENIFSDIKQYGILFQHNK
RWQRLQAQRMKLLHKLSDSNKFANYFNDEINQISSSLSSISMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKM
YNEQVIDQE

Sequences:

>Translated_409_residues
MAASVKNILIGIFVLLALAIIVFLLLFLHPSVGDNAKTLRVRFTNIDKINVGSRVTFAGKPVGEVVSIEEIPDARIGRIN
HQGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEKNIEIDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQIST
QLKVVLEDFHDTFTILKNEKVIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKTLDAACQNFYQLSEKA
NISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGKLFVADDLYLRVKSILNKGENIFSDIKQYGILFQHNK
RWQRLQAQRMKLLHKLSDSNKFANYFNDEINQISSSLSSISMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKM
YNEQVIDQE
>Mature_408_residues
AASVKNILIGIFVLLALAIIVFLLLFLHPSVGDNAKTLRVRFTNIDKINVGSRVTFAGKPVGEVVSIEEIPDARIGRINH
QGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEKNIEIDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQISTQ
LKVVLEDFHDTFTILKNEKVIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKTLDAACQNFYQLSEKAN
ISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGKLFVADDLYLRVKSILNKGENIFSDIKQYGILFQHNKR
WQRLQAQRMKLLHKLSDSNKFANYFNDEINQISSSLSSISMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKMY
NEQVIDQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46150; Mature: 46018

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASVKNILIGIFVLLALAIIVFLLLFLHPSVGDNAKTLRVRFTNIDKINVGSRVTFAGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEECCCCEEEECCC
PVGEVVSIEEIPDARIGRINHQGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEKNIE
CCCCEEEHHHCCCCHHCCCCCCCCEEEEEEEEEECCCEEEECCCCEEEEECCCCCCCCCC
IDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQISTQLKVVLEDFHDTFTILKNEK
CCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKTLDAACQNFYQLSEKA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGKLFVADDLYLRVKSILN
CCEEEEHHHHHHHCCCHHHHHHHHCCCHHHHEEHHHCCCCCCEEEEEHHHHHHHHHHHHC
KGENIFSDIKQYGILFQHNKRWQRLQAQRMKLLHKLSDSNKFANYFNDEINQISSSLSSI
CCHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKMYNEQVIDQE
HHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AASVKNILIGIFVLLALAIIVFLLLFLHPSVGDNAKTLRVRFTNIDKINVGSRVTFAGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEECCCCEEEECCC
PVGEVVSIEEIPDARIGRINHQGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEKNIE
CCCCEEEHHHCCCCHHCCCCCCCCEEEEEEEEEECCCEEEECCCCEEEEECCCCCCCCCC
IDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQISTQLKVVLEDFHDTFTILKNEK
CCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKTLDAACQNFYQLSEKA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGKLFVADDLYLRVKSILN
CCEEEEHHHHHHHCCCHHHHHHHHCCCHHHHEEHHHCCCCCCEEEEEHHHHHHHHHHHHC
KGENIFSDIKQYGILFQHNKRWQRLQAQRMKLLHKLSDSNKFANYFNDEINQISSSLSSI
CCHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKMYNEQVIDQE
HHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA