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The map label for this gene is yrbE [C]

Identifier: 46447386

GI number: 46447386

Start: 2096082

End: 2096804

Strand: Direct

Name: yrbE [C]

Synonym: pc1752

Alternate gene names: 46447386

Gene position: 2096082-2096804 (Clockwise)

Preceding gene: 46447385

Following gene: 46447387

Centisome position: 86.81

GC content: 39.42

Gene sequence:

>723_bases
ATGGTTTCTTTACGGCGACCTCCGACTTGGATTCTTATCAGAGATCAGCTTTTTGATATTGGGGTCATGTCACTACCCGT
TGTTGCGATTACAGGTTTTTCGACAGGAATGGTTCTTGCTGCTCAATCTTTTTTTCAACTTTCTGACAAAGGCTTAGCAA
GCGCAACGGGATTAATGGTGGCTAAGGCTATGTTAGTTGAACTGGGACCTGTTTTAACAGCTTTCATGGTTACTGGAAGA
GTAGGAGCTGCTATGTGTGCAGAATTAGGAACCATGAGGGTCACAGAGCAGATAGATGCAATGCGCACCATGTCTGTTAA
TCCACTTGGGTATCTTGTCGCGCCTCGTTTTCTTGCGGGAATGATAATGATGCCATTACTAACAGTATTTAGCGCTATTA
TGGGGATTTTTGGAGGATATCTTATTGCTGTTTATTTTTATAAAATGCCAGCAAGCTCTTTTATTGATCCTTTACCTCTT
CATATCAACACATTTGATTTTATTAGTGGCATGGTTAAAGCCTTTGTATTTGGGATTATCATTGTAACGATTTCTTGTTA
TAAAGGTATGAAAACCCGAGGTGGAGCTGCAGGAGTGGGACGTTCAACAACCAATAGCGTTGTCATTTGCTATTCTGTCA
TTCTCATTATAAACTTCATCTTAACTCTTGGCCTAAATTCTTCCTTTAACTTCATTAATGAGTTTTTGACGAAATGGTTT
TAA

Upstream 100 bases:

>100_bases
TTTCTTTTTATCATTTTTATCGTGTATTTTAATGAATTCTATTTTCTTCAATATTTTATCTTCGTTTGGAGATTATATTC
TTCTGATTACTAACGTGATA

Downstream 100 bases:

>100_bases
GAGATAATACCAAACGTTAACTTTGCTTAAACATATAGTGATGCACCAATCATGATTCGGGTTCAGAAAATTTGGAAAAG
TTATGGCAAATTGCAAGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MVSLRRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAMLVELGPVLTAFMVTGR
VGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMMPLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPL
HINTFDFISGMVKAFVFGIIIVTISCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTLGLNSSFNFINEFLTKWF

Sequences:

>Translated_240_residues
MVSLRRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAMLVELGPVLTAFMVTGR
VGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMMPLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPL
HINTFDFISGMVKAFVFGIIIVTISCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTLGLNSSFNFINEFLTKWF
>Mature_240_residues
MVSLRRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAMLVELGPVLTAFMVTGR
VGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMMPLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPL
HINTFDFISGMVKAFVFGIIIVTISCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTLGLNSSFNFINEFLTKWF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=213, Percent_Identity=36.6197183098592, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26011; Mature: 26011

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA