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The map label for this gene is ytfM [H]

Identifier: 46447383

GI number: 46447383

Start: 2089174

End: 2091126

Strand: Direct

Name: ytfM [H]

Synonym: pc1749

Alternate gene names: 46447383

Gene position: 2089174-2091126 (Clockwise)

Preceding gene: 46447381

Following gene: 46447384

Centisome position: 86.53

GC content: 33.95

Gene sequence:

>1953_bases
TTGCTAACTTTTTTTAATATTTTTAACCTATGTCTTTCGTCTACATTAATGATAATGTTTAAAATCATTATTGTTTTCTA
CTCATTTTTGAAGGACATTTTTAGCATTATTCGCCCATTCAAACAAAATTGTGATCAGCGAATAAACAACCTATTTAAAA
ACTTTTGGAATAAAGAATTAGCTTTTAAAAATAGTAAAAAGACCTTTATTTTAGCAGCGCTATTTTCAAATTTATTTTCA
TCAATTTTTTGTTACGAAGTTTATTTTGAAGGAATTCAAGATCAAGAAGCTATTTCTTTACTTGAATCAGTTTCACAACT
CGTTAAACTCAAAAATTCTCCTCCTGCTACAATAACAGGAATAAGAAGACGGGCGGAATCAGATCTTTCTGACTTAACTT
TAGCCATGCAAAGTTTAGCTTATTACGAGGCAAAAGTTTCTTTTCAAGTTGCAGAAGATGGATCTTCTGTCACTATTCAG
GTCATACCTGGACCTATTTATCCTTTAGAAGCATTTATTATTCGCTATTTCCAAATGGGAGAAGAGTTAGATTCAGCACT
TACCTCTTTCCCGTCATTATGTGAACTAAAAGTAACTTTAGGAGAACGTGCCCTTCCTGAAGTGATTTTAACGGCAGAAG
ATATATTATTAGATAAGCTTAACCTTCAAGGCTATGCTTTCGCAAAAATCAGAAAAAGAGATGTTTTTGCTGATCTGAAA
AAAGATGTTGTCGTTGTCCTATTAGAAGTAGAAATTGGGCCTCTAACTTACTTTGGCCCTATCAAAATTAATGGTTGCGA
TCGCGTAAAAAAAAGCTTTTTTTATAAGAAATTGCACTGGAATCAAGGAGAACTTTACGACCCTAAAAAATTAGAAAAAA
CTCAAGAAGCCCTTGAACTTTCTGGATTATTTAGTTCAATTAATATTAGCCCTGCACAAGAACCTGTTCAAGGAAATTTG
CTTCCACTTGAAATAAATGTTTTAGAAGCAAAACAAAGAAGTATGGGTTTTGGAGTAAATTATACCACTCAATTTGGACC
TGGAATTACGGCCGAATGGGAGGATCGCAATATTGCTGGAGAAGGACAAAAAGTGAGCTTCCGAACAGATTTATGGGAAA
AATTACAAGATGCTAGAATTTCTTACTTAATTCCTGATTATCGAAGGCAAAATCAAAACTTAGTCTGGCTCTTAGACTAT
AATCATGAAAGAACAAAAGCTTTTACCGAAAAAGCACTTTCAGTCTCAGCAACTATTGAAAGGAAGCTTTCAGATCAACT
ACGCGTCTCATATGGCTTAATGTATAAACTTTTGCGCAGCGAAAGATCTGAACGTAACGGGACCTTCGATTTATTTAAAA
TTCCGCTTCAGCTACAATGGGCAAATGTAGATAGTCTATTAGATCCGACAAAAGGAGCTGCCGTCCAACTTAGAATCATT
CCATCGGTGCAGTTTATTTCTCCTTTTTTTGCCTATTCAATTAATTCATTAACAACTTCTCTCTACCAAGCTCTTACAAA
AAATAAAAAGCATGTTTTTGCTGTAAAATTAATGTTTGGAACTATTTTAGGAGCGAGTAAACATGATATCCCTCCTCCAG
AACGTTTTTATGCCGGTGCTGAAAATGCTTTAAGAGGTTATCGCTATTTAACTGTCAGTCCAATTGGAAGAGAGCATAAA
CCCTTAGGTGGACGTTCCTTATTCATTTACTCATTAGAATTACGAAGTAAACTCACGAAAAATTTTGGCCTTGTTACCTT
TTACGAAATAGGAAATGTTTTTCAAAATTATTACCCCAATTTCCGAAAAAAATTTTTACAATCGATTGGATTAGGGATTC
GATATTATACACCTATTGGACCTTTGCGTCTGGATTTTGCTGTGCCCGTCAACAGAAGAAAACATATCGATAATGCTTTT
GAAGTCTATTTTAGTATTGGCCAATCATTTTAA

Upstream 100 bases:

>100_bases
AATCGCAAGAATTATGCATATAAAATTGTAAGCTAGAAGTTTTATCTCATAGACCAAAAACAAATTTCTTCAATTATTTA
GAAAATTTAGGGATGCTTAG

Downstream 100 bases:

>100_bases
TAATAAACACGTTGAATATTATGAAACTATTAAAATCTCTTGTTAAAGTCTTTTTAACATTGCTTACAACTTTAATATTT
ATTTGGATAGTCTTGATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MLTFFNIFNLCLSSTLMIMFKIIIVFYSFLKDIFSIIRPFKQNCDQRINNLFKNFWNKELAFKNSKKTFILAALFSNLFS
SIFCYEVYFEGIQDQEAISLLESVSQLVKLKNSPPATITGIRRRAESDLSDLTLAMQSLAYYEAKVSFQVAEDGSSVTIQ
VIPGPIYPLEAFIIRYFQMGEELDSALTSFPSLCELKVTLGERALPEVILTAEDILLDKLNLQGYAFAKIRKRDVFADLK
KDVVVVLLEVEIGPLTYFGPIKINGCDRVKKSFFYKKLHWNQGELYDPKKLEKTQEALELSGLFSSINISPAQEPVQGNL
LPLEINVLEAKQRSMGFGVNYTTQFGPGITAEWEDRNIAGEGQKVSFRTDLWEKLQDARISYLIPDYRRQNQNLVWLLDY
NHERTKAFTEKALSVSATIERKLSDQLRVSYGLMYKLLRSERSERNGTFDLFKIPLQLQWANVDSLLDPTKGAAVQLRII
PSVQFISPFFAYSINSLTTSLYQALTKNKKHVFAVKLMFGTILGASKHDIPPPERFYAGAENALRGYRYLTVSPIGREHK
PLGGRSLFIYSLELRSKLTKNFGLVTFYEIGNVFQNYYPNFRKKFLQSIGLGIRYYTPIGPLRLDFAVPVNRRKHIDNAF
EVYFSIGQSF

Sequences:

>Translated_650_residues
MLTFFNIFNLCLSSTLMIMFKIIIVFYSFLKDIFSIIRPFKQNCDQRINNLFKNFWNKELAFKNSKKTFILAALFSNLFS
SIFCYEVYFEGIQDQEAISLLESVSQLVKLKNSPPATITGIRRRAESDLSDLTLAMQSLAYYEAKVSFQVAEDGSSVTIQ
VIPGPIYPLEAFIIRYFQMGEELDSALTSFPSLCELKVTLGERALPEVILTAEDILLDKLNLQGYAFAKIRKRDVFADLK
KDVVVVLLEVEIGPLTYFGPIKINGCDRVKKSFFYKKLHWNQGELYDPKKLEKTQEALELSGLFSSINISPAQEPVQGNL
LPLEINVLEAKQRSMGFGVNYTTQFGPGITAEWEDRNIAGEGQKVSFRTDLWEKLQDARISYLIPDYRRQNQNLVWLLDY
NHERTKAFTEKALSVSATIERKLSDQLRVSYGLMYKLLRSERSERNGTFDLFKIPLQLQWANVDSLLDPTKGAAVQLRII
PSVQFISPFFAYSINSLTTSLYQALTKNKKHVFAVKLMFGTILGASKHDIPPPERFYAGAENALRGYRYLTVSPIGREHK
PLGGRSLFIYSLELRSKLTKNFGLVTFYEIGNVFQNYYPNFRKKFLQSIGLGIRYYTPIGPLRLDFAVPVNRRKHIDNAF
EVYFSIGQSF
>Mature_650_residues
MLTFFNIFNLCLSSTLMIMFKIIIVFYSFLKDIFSIIRPFKQNCDQRINNLFKNFWNKELAFKNSKKTFILAALFSNLFS
SIFCYEVYFEGIQDQEAISLLESVSQLVKLKNSPPATITGIRRRAESDLSDLTLAMQSLAYYEAKVSFQVAEDGSSVTIQ
VIPGPIYPLEAFIIRYFQMGEELDSALTSFPSLCELKVTLGERALPEVILTAEDILLDKLNLQGYAFAKIRKRDVFADLK
KDVVVVLLEVEIGPLTYFGPIKINGCDRVKKSFFYKKLHWNQGELYDPKKLEKTQEALELSGLFSSINISPAQEPVQGNL
LPLEINVLEAKQRSMGFGVNYTTQFGPGITAEWEDRNIAGEGQKVSFRTDLWEKLQDARISYLIPDYRRQNQNLVWLLDY
NHERTKAFTEKALSVSATIERKLSDQLRVSYGLMYKLLRSERSERNGTFDLFKIPLQLQWANVDSLLDPTKGAAVQLRII
PSVQFISPFFAYSINSLTTSLYQALTKNKKHVFAVKLMFGTILGASKHDIPPPERFYAGAENALRGYRYLTVSPIGREHK
PLGGRSLFIYSLELRSKLTKNFGLVTFYEIGNVFQNYYPNFRKKFLQSIGLGIRYYTPIGPLRLDFAVPVNRRKHIDNAF
EVYFSIGQSF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=397, Percent_Identity=23.4256926952141, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI1786374, Length=581, Percent_Identity=19.9655765920826, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 74461; Mature: 74461

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFFNIFNLCLSSTLMIMFKIIIVFYSFLKDIFSIIRPFKQNCDQRINNLFKNFWNKEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AFKNSKKTFILAALFSNLFSSIFCYEVYFEGIQDQEAISLLESVSQLVKLKNSPPATITG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
IRRRAESDLSDLTLAMQSLAYYEAKVSFQVAEDGSSVTIQVIPGPIYPLEAFIIRYFQMG
HHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHH
EELDSALTSFPSLCELKVTLGERALPEVILTAEDILLDKLNLQGYAFAKIRKRDVFADLK
HHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHC
KDVVVVLLEVEIGPLTYFGPIKINGCDRVKKSFFYKKLHWNQGELYDPKKLEKTQEALEL
CCEEEEEEEEEECCEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SGLFSSINISPAQEPVQGNLLPLEINVLEAKQRSMGFGVNYTTQFGPGITAEWEDRNIAG
HHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
EGQKVSFRTDLWEKLQDARISYLIPDYRRQNQNLVWLLDYNHERTKAFTEKALSVSATIE
CCCEEEEHHHHHHHHHHCCEEEECCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
RKLSDQLRVSYGLMYKLLRSERSERNGTFDLFKIPLQLQWANVDSLLDPTKGAAVQLRII
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEEEE
PSVQFISPFFAYSINSLTTSLYQALTKNKKHVFAVKLMFGTILGASKHDIPPPERFYAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCC
ENALRGYRYLTVSPIGREHKPLGGRSLFIYSLELRSKLTKNFGLVTFYEIGNVFQNYYPN
HHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCEEHHHHHHHHHHHCCH
FRKKFLQSIGLGIRYYTPIGPLRLDFAVPVNRRKHIDNAFEVYFSIGQSF
HHHHHHHHHCCCEEEECCCCCEEEEEECCCCHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLTFFNIFNLCLSSTLMIMFKIIIVFYSFLKDIFSIIRPFKQNCDQRINNLFKNFWNKEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AFKNSKKTFILAALFSNLFSSIFCYEVYFEGIQDQEAISLLESVSQLVKLKNSPPATITG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
IRRRAESDLSDLTLAMQSLAYYEAKVSFQVAEDGSSVTIQVIPGPIYPLEAFIIRYFQMG
HHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHH
EELDSALTSFPSLCELKVTLGERALPEVILTAEDILLDKLNLQGYAFAKIRKRDVFADLK
HHHHHHHHCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHC
KDVVVVLLEVEIGPLTYFGPIKINGCDRVKKSFFYKKLHWNQGELYDPKKLEKTQEALEL
CCEEEEEEEEEECCEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SGLFSSINISPAQEPVQGNLLPLEINVLEAKQRSMGFGVNYTTQFGPGITAEWEDRNIAG
HHHHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
EGQKVSFRTDLWEKLQDARISYLIPDYRRQNQNLVWLLDYNHERTKAFTEKALSVSATIE
CCCEEEEHHHHHHHHHHCCEEEECCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
RKLSDQLRVSYGLMYKLLRSERSERNGTFDLFKIPLQLQWANVDSLLDPTKGAAVQLRII
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHCCCCCCCEEEEEEE
PSVQFISPFFAYSINSLTTSLYQALTKNKKHVFAVKLMFGTILGASKHDIPPPERFYAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHCCC
ENALRGYRYLTVSPIGREHKPLGGRSLFIYSLELRSKLTKNFGLVTFYEIGNVFQNYYPN
HHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCEEHHHHHHHHHHHCCH
FRKKFLQSIGLGIRYYTPIGPLRLDFAVPVNRRKHIDNAFEVYFSIGQSF
HHHHHHHHHCCCEEEECCCCCEEEEEECCCCHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]