| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447377
Identifier: 46447377
GI number: 46447377
Start: 2084520
End: 2084849
Strand: Direct
Name: 46447377
Synonym: pc1743
Alternate gene names: NA
Gene position: 2084520-2084849 (Clockwise)
Preceding gene: 46447376
Following gene: 46447380
Centisome position: 86.33
GC content: 32.12
Gene sequence:
>330_bases TTGCAAACAAAGGAGATGTTTATGATAAGTGGATTAAATGGATTTGGACATCATTATTTTCCAAGTGAAGAAAATGAGTT TTTTCAGAAAAAGCAAAATTGTTCAGTTGAATCTGCAAATAGAGAAAAATCTTCTATTCATTCGCAGCAAATTTCTGAGC AAATTTCCCGTGTTTCTGAAGCTGATATTAAAAAATTAATGAGTCAAACTAATATTACCGAAGCAAAGGCAAAAGAAATT TTAGAGGATCGAGAGTTTTATATTGAATTTGCTATGAAGCAAGGTTTAACTAGACAAGCGGCAGAGGAAGAGGTAGATTC TGCCTATTAA
Upstream 100 bases:
>100_bases TTTTTAAAGTTTTAAAAATAAGCTATTTGAATATAAATACTACATTTGCTAAAGTAATGAAGTTGGCAAACGTTAAAAAT TTTAAATGATCATTATTAAA
Downstream 100 bases:
>100_bases AATTCAAAGCTAGTTAAAATTTATTTTTCATTAACTCCTTTTTGGTAATTGAGGCACATTAACAAAAATTTTTAAGTTTA AAAACTAAACTGTAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQTKEMFMISGLNGFGHHYFPSEENEFFQKKQNCSVESANREKSSIHSQQISEQISRVSEADIKKLMSQTNITEAKAKEI LEDREFYIEFAMKQGLTRQAAEEEVDSAY
Sequences:
>Translated_109_residues MQTKEMFMISGLNGFGHHYFPSEENEFFQKKQNCSVESANREKSSIHSQQISEQISRVSEADIKKLMSQTNITEAKAKEI LEDREFYIEFAMKQGLTRQAAEEEVDSAY >Mature_109_residues MQTKEMFMISGLNGFGHHYFPSEENEFFQKKQNCSVESANREKSSIHSQQISEQISRVSEADIKKLMSQTNITEAKAKEI LEDREFYIEFAMKQGLTRQAAEEEVDSAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12620
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKEMFMISGLNGFGHHYFPSEENEFFQKKQNCSVESANREKSSIHSQQISEQISRVSE CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ADIKKLMSQTNITEAKAKEILEDREFYIEFAMKQGLTRQAAEEEVDSAY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MQTKEMFMISGLNGFGHHYFPSEENEFFQKKQNCSVESANREKSSIHSQQISEQISRVSE CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ADIKKLMSQTNITEAKAKEILEDREFYIEFAMKQGLTRQAAEEEVDSAY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA