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The map label for this gene is 46447361

Identifier: 46447361

GI number: 46447361

Start: 2065598

End: 2066170

Strand: Direct

Name: 46447361

Synonym: pc1727

Alternate gene names: NA

Gene position: 2065598-2066170 (Clockwise)

Preceding gene: 46447360

Following gene: 46447362

Centisome position: 85.55

GC content: 32.98

Gene sequence:

>573_bases
ATGAAAAATCTACGTCAATTACTATTAACTCTATTTTGTACCTTTGTCGTTTCAACGTCGGCATTTGCCCAAACAACTTC
CCAACCTTTAAAGATTGGAATTGTCAATGCAAAAAAATGCTTGGATGAATCTAAATTAGGTAAGCAAGAACAAGCAAATT
TTGACAAAATGAAAAAACAAATGGAGTCTATTCTTCAAGATAAAGAACGTGATTTAGAAGAACTTGAAAGCAAAATCAAT
GATGAAGATTACATGGATAGCATTTCGGAAGAAGCTGCTAGCGAACTAAAACGTAAAAAACGAAATCTAAAAAATGAAGG
ACTACAACTTCAAAATCAATATATTCAAACTTTACAGCAAGCAAATCTTAAAATCGTACAAAAATTAACAGACACAATCG
CAAAAGCCTCTAGTCAAGTTGCTCAAGATACTACAATTGGCCAAGCTGTGGATGTGATTTTTAGCGATGAAGCTTGTACC
TATTTTGCTCCTGGACTAGATGTTACTGATCGTGTTGTCACTAAAATGAATGCTATCTATGATAATGAACAAAAAGAAGC
CTCTAAAAAATAG

Upstream 100 bases:

>100_bases
TTTAAACAACATTTTTGGAACTAAATTGTTCATTAGCTGAAAATAATGGCGGTTCTGAAGAACTATAGATGAAATGTGAG
TATTTACAAGGAGAAGACTT

Downstream 100 bases:

>100_bases
ATATTTGTAAATAAAGTAAAAAAAGAAAAAAATTAGCTTGAAAGTACGCTTTTTCGACTAATACCAAATTGAAAAAATAA
ATGTTATTTTTTCGATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKNLRQLLLTLFCTFVVSTSAFAQTTSQPLKIGIVNAKKCLDESKLGKQEQANFDKMKKQMESILQDKERDLEELESKIN
DEDYMDSISEEAASELKRKKRNLKNEGLQLQNQYIQTLQQANLKIVQKLTDTIAKASSQVAQDTTIGQAVDVIFSDEACT
YFAPGLDVTDRVVTKMNAIYDNEQKEASKK

Sequences:

>Translated_190_residues
MKNLRQLLLTLFCTFVVSTSAFAQTTSQPLKIGIVNAKKCLDESKLGKQEQANFDKMKKQMESILQDKERDLEELESKIN
DEDYMDSISEEAASELKRKKRNLKNEGLQLQNQYIQTLQQANLKIVQKLTDTIAKASSQVAQDTTIGQAVDVIFSDEACT
YFAPGLDVTDRVVTKMNAIYDNEQKEASKK
>Mature_190_residues
MKNLRQLLLTLFCTFVVSTSAFAQTTSQPLKIGIVNAKKCLDESKLGKQEQANFDKMKKQMESILQDKERDLEELESKIN
DEDYMDSISEEAASELKRKKRNLKNEGLQLQNQYIQTLQQANLKIVQKLTDTIAKASSQVAQDTTIGQAVDVIFSDEACT
YFAPGLDVTDRVVTKMNAIYDNEQKEASKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 21494; Mature: 21494

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLRQLLLTLFCTFVVSTSAFAQTTSQPLKIGIVNAKKCLDESKLGKQEQANFDKMKKQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHCCHHHHHHH
MESILQDKERDLEELESKINDEDYMDSISEEAASELKRKKRNLKNEGLQLQNQYIQTLQQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLKIVQKLTDTIAKASSQVAQDTTIGQAVDVIFSDEACTYFAPGLDVTDRVVTKMNAIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHH
DNEQKEASKK
CCHHHHHCCC
>Mature Secondary Structure
MKNLRQLLLTLFCTFVVSTSAFAQTTSQPLKIGIVNAKKCLDESKLGKQEQANFDKMKKQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHCCHHHHHHH
MESILQDKERDLEELESKINDEDYMDSISEEAASELKRKKRNLKNEGLQLQNQYIQTLQQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLKIVQKLTDTIAKASSQVAQDTTIGQAVDVIFSDEACTYFAPGLDVTDRVVTKMNAIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHH
DNEQKEASKK
CCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10463174; 9784136 [H]