| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447332
Identifier: 46447332
GI number: 46447332
Start: 2036712
End: 2037230
Strand: Direct
Name: 46447332
Synonym: pc1698
Alternate gene names: NA
Gene position: 2036712-2037230 (Clockwise)
Preceding gene: 46447331
Following gene: 46447333
Centisome position: 84.35
GC content: 32.56
Gene sequence:
>519_bases ATGGGTCGTCTAAGTTTATTATTTTTTTACACATTGGGCCTAACACTTATTTTACCTATTTTATTACCGCACCTTCCCCT CTTATATTTCGCTCCATTTCTAGTTATAGCCATCTATAAAAGAGAAAAGACCGATTGTTTATGGCTCGCTTTTCTTTGTG GTTTATTTGTAGATTTACTCTCTTTTCAAATGAGATTAGGATTTTACGCCTTAAATTATGTGTTAACCATCGAACTCTTA TACTATTTTAAACGTCATTTTTTTGAAGATGGATTATATACCGTATCTATTTTGACAAGCTTGTTTAGTATTTTATTTGT TGTTATCCATGTCTCATTGTTTTTTATGTTTGGCCATGGGCTCAAGTTAACGGGTGCTTGGGTAAAAAACGATTTAATTT GGATGCCGATTTGTGATGGCATTTATGCTCTCCTGGTTTTTAGCTTACCCTCTCTTTTTTTACCCAAAAGACAGGTTTTT AGAAGAAATAAAGTGATTTTACAAAGAGAGAACAAATGA
Upstream 100 bases:
>100_bases GGTGCTTATTAATTTGATCTTTGGTTTTTTTACTCAAAAATACTTGCTACTAAGCGTTATTAACTTTAGTCTTTATATTT AGCTTTTTATAAAAATAATC
Downstream 100 bases:
>100_bases TAAAAAAAGTTCTGCCTCTCGCTGAACAGCTACGGCCTAAAAACTTAAATGATATTGTCGGACAGGACCACATTTTAGGA GAAAACGGGTTAATCACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MGRLSLLFFYTLGLTLILPILLPHLPLLYFAPFLVIAIYKREKTDCLWLAFLCGLFVDLLSFQMRLGFYALNYVLTIELL YYFKRHFFEDGLYTVSILTSLFSILFVVIHVSLFFMFGHGLKLTGAWVKNDLIWMPICDGIYALLVFSLPSLFLPKRQVF RRNKVILQRENK
Sequences:
>Translated_172_residues MGRLSLLFFYTLGLTLILPILLPHLPLLYFAPFLVIAIYKREKTDCLWLAFLCGLFVDLLSFQMRLGFYALNYVLTIELL YYFKRHFFEDGLYTVSILTSLFSILFVVIHVSLFFMFGHGLKLTGAWVKNDLIWMPICDGIYALLVFSLPSLFLPKRQVF RRNKVILQRENK >Mature_171_residues GRLSLLFFYTLGLTLILPILLPHLPLLYFAPFLVIAIYKREKTDCLWLAFLCGLFVDLLSFQMRLGFYALNYVLTIELLY YFKRHFFEDGLYTVSILTSLFSILFVVIHVSLFFMFGHGLKLTGAWVKNDLIWMPICDGIYALLVFSLPSLFLPKRQVFR RNKVILQRENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20205; Mature: 20074
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLSLLFFYTLGLTLILPILLPHLPLLYFAPFLVIAIYKREKTDCLWLAFLCGLFVDLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SFQMRLGFYALNYVLTIELLYYFKRHFFEDGLYTVSILTSLFSILFVVIHVSLFFMFGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LKLTGAWVKNDLIWMPICDGIYALLVFSLPSLFLPKRQVFRRNKVILQRENK CEEEHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCC >Mature Secondary Structure GRLSLLFFYTLGLTLILPILLPHLPLLYFAPFLVIAIYKREKTDCLWLAFLCGLFVDLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SFQMRLGFYALNYVLTIELLYYFKRHFFEDGLYTVSILTSLFSILFVVIHVSLFFMFGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LKLTGAWVKNDLIWMPICDGIYALLVFSLPSLFLPKRQVFRRNKVILQRENK CEEEHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA