Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447242

Identifier: 46447242

GI number: 46447242

Start: 1922564

End: 1923043

Strand: Direct

Name: 46447242

Synonym: pc1608

Alternate gene names: NA

Gene position: 1922564-1923043 (Clockwise)

Preceding gene: 46447240

Following gene: 46447243

Centisome position: 79.63

GC content: 33.12

Gene sequence:

>480_bases
ATGATAGACCCTAAAGTTGATAAAAAGAAAGTAGATACAAAAGAATTTGAACTTCCAGAGACAGTTTTTATTCGAGATAT
TGAAGATAAAGTTTTCCAATCTATTGCTTTGCAATGTCTTGCGCAAATTGATGGAATTAGTCTAGTTGAGGGAAATTATA
TCGATCATCTTCTAGGCCGTATTGCTGAAGGTGTAAAAGGCATTTACGCCGAACAAGATGATAAAAATCAATCTGTAAAT
ATTAAAGTAGAAGTAAACATTTTATTTGGAACCTCAATTCCAGAAAAAGCCGAAGAAATTCAAACAAAAATTGCAGAAGA
AATCACAAAGTTAACAGGCCTACACGTTTCCTCTGTTCATGTCGTATTTAAAAATGTCATTTCTCATGAGCAAGCCCAGA
AATTAAGCCAAAGTTTTACACAAGGTCCTCCCAAATTAATGGGAACCAACTTAGATGAAGATTATTCCGATGAATTTTAA

Upstream 100 bases:

>100_bases
ATTTATACAAATATGCTTAATCATTTAAAGACTTGTTTAAATAAAATTGCTCAATTGATACGTAAGTGAAGCGGATCTAA
TTGCTACAAGGAAAAAGTTC

Downstream 100 bases:

>100_bases
ATTTGAACGTTTTTTCTACGTAGCTATTAGTTTTATTTTTGGAGCTTTCTTCTTTGTTGTTGGTGTGTTCAGTATTGCGT
TACCTTGGTCTGAACTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN
IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF

Sequences:

>Translated_159_residues
MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN
IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF
>Mature_159_residues
MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN
IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17832; Mature: 17832

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGR
CCCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH
IAEGVKGIYAEQDDKNQSVNIKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVH
HHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
VVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGR
CCCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH
IAEGVKGIYAEQDDKNQSVNIKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVH
HHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
VVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA