| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447242
Identifier: 46447242
GI number: 46447242
Start: 1922564
End: 1923043
Strand: Direct
Name: 46447242
Synonym: pc1608
Alternate gene names: NA
Gene position: 1922564-1923043 (Clockwise)
Preceding gene: 46447240
Following gene: 46447243
Centisome position: 79.63
GC content: 33.12
Gene sequence:
>480_bases ATGATAGACCCTAAAGTTGATAAAAAGAAAGTAGATACAAAAGAATTTGAACTTCCAGAGACAGTTTTTATTCGAGATAT TGAAGATAAAGTTTTCCAATCTATTGCTTTGCAATGTCTTGCGCAAATTGATGGAATTAGTCTAGTTGAGGGAAATTATA TCGATCATCTTCTAGGCCGTATTGCTGAAGGTGTAAAAGGCATTTACGCCGAACAAGATGATAAAAATCAATCTGTAAAT ATTAAAGTAGAAGTAAACATTTTATTTGGAACCTCAATTCCAGAAAAAGCCGAAGAAATTCAAACAAAAATTGCAGAAGA AATCACAAAGTTAACAGGCCTACACGTTTCCTCTGTTCATGTCGTATTTAAAAATGTCATTTCTCATGAGCAAGCCCAGA AATTAAGCCAAAGTTTTACACAAGGTCCTCCCAAATTAATGGGAACCAACTTAGATGAAGATTATTCCGATGAATTTTAA
Upstream 100 bases:
>100_bases ATTTATACAAATATGCTTAATCATTTAAAGACTTGTTTAAATAAAATTGCTCAATTGATACGTAAGTGAAGCGGATCTAA TTGCTACAAGGAAAAAGTTC
Downstream 100 bases:
>100_bases ATTTGAACGTTTTTTCTACGTAGCTATTAGTTTTATTTTTGGAGCTTTCTTCTTTGTTGTTGGTGTGTTCAGTATTGCGT TACCTTGGTCTGAACTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF
Sequences:
>Translated_159_residues MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF >Mature_159_residues MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGRIAEGVKGIYAEQDDKNQSVN IKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVHVVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17832; Mature: 17832
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGR CCCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH IAEGVKGIYAEQDDKNQSVNIKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVH HHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH VVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MIDPKVDKKKVDTKEFELPETVFIRDIEDKVFQSIALQCLAQIDGISLVEGNYIDHLLGR CCCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHH IAEGVKGIYAEQDDKNQSVNIKVEVNILFGTSIPEKAEEIQTKIAEEITKLTGLHVSSVH HHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH VVFKNVISHEQAQKLSQSFTQGPPKLMGTNLDEDYSDEF HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA