| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447141
Identifier: 46447141
GI number: 46447141
Start: 1796322
End: 1798193
Strand: Direct
Name: 46447141
Synonym: pc1507
Alternate gene names: NA
Gene position: 1796322-1798193 (Clockwise)
Preceding gene: 46447140
Following gene: 46447142
Centisome position: 74.4
GC content: 37.39
Gene sequence:
>1872_bases TTGAATATTCATAACCCAAGTTTTAATCCTAGTAATCTCCTTGTTAATGCAGACACTCATTCTTACTCTCGTTCAAACAA ACATTTAAAATTTTTTGAACGAATAAATTTATTATGCAAAACAATTTTTCAGGGTTTTTCAAGCCTATTCTTTAATTATC TCAAAAAAGATTTACTTCAATTTCAATGGAGAAAACTTTTAGGAGAACAAAAAGAAATTGTCATTTCTAATTTTACTATA ACTCATTTAGAATCAGAATCTGATGTATCTTTATCAAGTTTGAGTCAAACTTCATACTTTGCCCCCCCTTCTTCCAGACT GAGCTTCCAGGATAATACTCATCTAAATATTTCAAGTTTCCAAAAATCTTTGTTAATGGAAAAATCGCCTTATTTTAAGA GTCTTTGGTCAGGAAGTTTTCAAGAAACTCTTCAAGATCCTCTCGCTTTGACACAAAAAGAATTTACTCATCTACTCTAT TCTCTAATCAACGCTAATTTTAAATTTCCTTTCGAAGACATCCCTTCTTTCATTCAACTGGCCGATTATTATCAACTGAC AGAAGTTGTGAAAAATTTAGAAGAACAGTTGCTTAATGGGTATAAATCAGAGAAATTTAAGTTTTTCAATTCCAACGAAG ACAGCTTAGTGGAATTAAAAGAACTTTTAAATTTTGCGCAACAATATCAATTAGACACTCTAAAAAATTATTTAGAGCTT ACAGCTGTGAGTTCATTATTAAATCAGACTTCTCAATTAACGGAATTTGAAAAAATCTTAAATTATTTCTCAAATGAGGT AGAAGCACTCAATTTTTCAGAAAATGCCCATTTGACTGATGCCCATCTCTTAGCGTTAAAAACTTGTAAAAATTTAAAAG TGCTTTATCTTAAAAAATGCTGCAATCTCACGGATGCTGGATTATCACATTTGTCACCTTTAGTGGCGCTGCAGCATTTA GAGCTGAGTGATTGCCCTAGGCTTACTGACGCTGGATTGGCGCACTTGACATCCTTAGTGGCTTTACAGTATTTGAATCT GAGTGAGTGCTCTAATTTCACCGACGCTGGATTGGCGCACTTGACACCTTTATTGACTTTAACGCATTTGAACCTGAGTT GGTGCTATAATTTCACACATGCAGGATTAGCGCATTTAACTCCCTTAGTGGCTTTGCAGCATTTGAATCTGGGCCATTGT AGAAATATCACGGATGCTGGATTAGCGCATTTGTCACCCTTAGTGGCTCTGCAACATTTAAATTTGGGTTGGTGCAGCAA TCTCACAGATGCTGGTTTAGCGCATTTGTCACCCTTAGTGGCGCTGCAGCATTTAGATCTGGGTTGGTGCAGCAATCTCA CGGATGCTGGATTGGCGCACTTGACATCCTTAGTGGCGCTGCAGCATTTAGATCTGAGTTGGTGCTATTATCTCACGGAT GCTGGATTAGCGCATTTGTCACCTTTAGTGGCGCTGCAGCATTTAGATCTGAGTAATTGCCTTAGTCTTAAGGACGCTGG ATTAGCGCATTTAACACTTTTAGTCACTCTGAAGTATTTGAATTTGAATAAATGCCATAATCTCACGGATGCTGGATTGG CGCACTTGACACCCTTAGTGGCTTTACAGCATTTAGATCTGAGTCAGTGCCCTAATCTCACAGGCACTGGATTAGCGCAT TTAAATTCCTTAATGGCTTTACAGCATTTAGATATGAGTTGGTGCCATAATCTCACGGACGCTGGATTAACGCATTTAAC TCCCTTAGTAAATTTACGACATTTAAATCTAACTAAGTGCCCTAAACTCACTGACGCTGGATTAGCGCACTTGGCACCCT TAGTCGCATTAGAGCATTTAGATCTGAGTTAG
Upstream 100 bases:
>100_bases TAAAAGCAATTTTCACTTTATTCTAATCGCATATTTAATATCACTAATATTAATTAGGATATATATAATAAAAATTATTT AACTAATTTGGATGGTAAAT
Downstream 100 bases:
>100_bases AGCCGTAATTTCACCGACGCTGGATTAGTGCATTTAACTCCCTTAGTAACTGTTAAAAAATTTATGCGGGTTGATTATAA CTTCATTTGAATTGGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS
Sequences:
>Translated_623_residues MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS >Mature_623_residues MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=297, Percent_Identity=35.016835016835, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI284447308, Length=308, Percent_Identity=31.8181818181818, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI27734755, Length=413, Percent_Identity=27.6029055690073, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI161333852, Length=299, Percent_Identity=28.7625418060201, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI6912466, Length=279, Percent_Identity=30.1075268817204, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI161333854, Length=378, Percent_Identity=25.3968253968254, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI296531375, Length=284, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI289666746, Length=273, Percent_Identity=36.6300366300366, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI284447314, Length=257, Percent_Identity=32.6848249027237, Blast_Score=90, Evalue=8e-18, Organism=Caenorhabditis elegans, GI25151694, Length=332, Percent_Identity=29.5180722891566, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25151696, Length=332, Percent_Identity=29.5180722891566, Blast_Score=105, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6322549, Length=352, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI17647819, Length=300, Percent_Identity=34, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24662818, Length=262, Percent_Identity=35.4961832061069, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI24652783, Length=313, Percent_Identity=31.629392971246, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI161076545, Length=313, Percent_Identity=31.629392971246, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI161076549, Length=313, Percent_Identity=31.629392971246, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI161076547, Length=313, Percent_Identity=31.629392971246, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357913, Length=231, Percent_Identity=33.7662337662338, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24646754, Length=356, Percent_Identity=26.685393258427, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69655; Mature: 69655
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQ CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQWRKLLGEQKEIVISNFTITHLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSF HHHHHHCCCCCEEEEECEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH QKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLYSLINANFKFPFEDIPSFIQL HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKC HHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH CNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAH CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHH LTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHL HHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC NLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD CCHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLV CCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH ALQHLDLSQCPNLTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKC HHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHCCCCCCCCC PKLTDAGLAHLAPLVALEHLDLS CCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQ CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQWRKLLGEQKEIVISNFTITHLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSF HHHHHHCCCCCEEEEECEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH QKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLYSLINANFKFPFEDIPSFIQL HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKC HHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH CNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAH CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHH LTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHL HHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC NLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD CCHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLV CCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH ALQHLDLSQCPNLTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKC HHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHCCCCCCCCC PKLTDAGLAHLAPLVALEHLDLS CCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA