Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447141

Identifier: 46447141

GI number: 46447141

Start: 1796322

End: 1798193

Strand: Direct

Name: 46447141

Synonym: pc1507

Alternate gene names: NA

Gene position: 1796322-1798193 (Clockwise)

Preceding gene: 46447140

Following gene: 46447142

Centisome position: 74.4

GC content: 37.39

Gene sequence:

>1872_bases
TTGAATATTCATAACCCAAGTTTTAATCCTAGTAATCTCCTTGTTAATGCAGACACTCATTCTTACTCTCGTTCAAACAA
ACATTTAAAATTTTTTGAACGAATAAATTTATTATGCAAAACAATTTTTCAGGGTTTTTCAAGCCTATTCTTTAATTATC
TCAAAAAAGATTTACTTCAATTTCAATGGAGAAAACTTTTAGGAGAACAAAAAGAAATTGTCATTTCTAATTTTACTATA
ACTCATTTAGAATCAGAATCTGATGTATCTTTATCAAGTTTGAGTCAAACTTCATACTTTGCCCCCCCTTCTTCCAGACT
GAGCTTCCAGGATAATACTCATCTAAATATTTCAAGTTTCCAAAAATCTTTGTTAATGGAAAAATCGCCTTATTTTAAGA
GTCTTTGGTCAGGAAGTTTTCAAGAAACTCTTCAAGATCCTCTCGCTTTGACACAAAAAGAATTTACTCATCTACTCTAT
TCTCTAATCAACGCTAATTTTAAATTTCCTTTCGAAGACATCCCTTCTTTCATTCAACTGGCCGATTATTATCAACTGAC
AGAAGTTGTGAAAAATTTAGAAGAACAGTTGCTTAATGGGTATAAATCAGAGAAATTTAAGTTTTTCAATTCCAACGAAG
ACAGCTTAGTGGAATTAAAAGAACTTTTAAATTTTGCGCAACAATATCAATTAGACACTCTAAAAAATTATTTAGAGCTT
ACAGCTGTGAGTTCATTATTAAATCAGACTTCTCAATTAACGGAATTTGAAAAAATCTTAAATTATTTCTCAAATGAGGT
AGAAGCACTCAATTTTTCAGAAAATGCCCATTTGACTGATGCCCATCTCTTAGCGTTAAAAACTTGTAAAAATTTAAAAG
TGCTTTATCTTAAAAAATGCTGCAATCTCACGGATGCTGGATTATCACATTTGTCACCTTTAGTGGCGCTGCAGCATTTA
GAGCTGAGTGATTGCCCTAGGCTTACTGACGCTGGATTGGCGCACTTGACATCCTTAGTGGCTTTACAGTATTTGAATCT
GAGTGAGTGCTCTAATTTCACCGACGCTGGATTGGCGCACTTGACACCTTTATTGACTTTAACGCATTTGAACCTGAGTT
GGTGCTATAATTTCACACATGCAGGATTAGCGCATTTAACTCCCTTAGTGGCTTTGCAGCATTTGAATCTGGGCCATTGT
AGAAATATCACGGATGCTGGATTAGCGCATTTGTCACCCTTAGTGGCTCTGCAACATTTAAATTTGGGTTGGTGCAGCAA
TCTCACAGATGCTGGTTTAGCGCATTTGTCACCCTTAGTGGCGCTGCAGCATTTAGATCTGGGTTGGTGCAGCAATCTCA
CGGATGCTGGATTGGCGCACTTGACATCCTTAGTGGCGCTGCAGCATTTAGATCTGAGTTGGTGCTATTATCTCACGGAT
GCTGGATTAGCGCATTTGTCACCTTTAGTGGCGCTGCAGCATTTAGATCTGAGTAATTGCCTTAGTCTTAAGGACGCTGG
ATTAGCGCATTTAACACTTTTAGTCACTCTGAAGTATTTGAATTTGAATAAATGCCATAATCTCACGGATGCTGGATTGG
CGCACTTGACACCCTTAGTGGCTTTACAGCATTTAGATCTGAGTCAGTGCCCTAATCTCACAGGCACTGGATTAGCGCAT
TTAAATTCCTTAATGGCTTTACAGCATTTAGATATGAGTTGGTGCCATAATCTCACGGACGCTGGATTAACGCATTTAAC
TCCCTTAGTAAATTTACGACATTTAAATCTAACTAAGTGCCCTAAACTCACTGACGCTGGATTAGCGCACTTGGCACCCT
TAGTCGCATTAGAGCATTTAGATCTGAGTTAG

Upstream 100 bases:

>100_bases
TAAAAGCAATTTTCACTTTATTCTAATCGCATATTTAATATCACTAATATTAATTAGGATATATATAATAAAAATTATTT
AACTAATTTGGATGGTAAAT

Downstream 100 bases:

>100_bases
AGCCGTAATTTCACCGACGCTGGATTAGTGCATTTAACTCCCTTAGTAACTGTTAAAAAATTTATGCGGGTTGATTATAA
CTTCATTTGAATTGGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI
THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY
SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL
TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL
ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC
RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD
AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH
LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS

Sequences:

>Translated_623_residues
MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI
THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY
SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL
TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL
ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC
RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD
AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH
LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS
>Mature_623_residues
MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQFQWRKLLGEQKEIVISNFTI
THLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSFQKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLY
SLINANFKFPFEDIPSFIQLADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL
TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHL
ELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHC
RNITDAGLAHLSPLVALQHLNLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD
AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPNLTGTGLAH
LNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLVALEHLDLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=297, Percent_Identity=35.016835016835, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI284447308, Length=308, Percent_Identity=31.8181818181818, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI27734755, Length=413, Percent_Identity=27.6029055690073, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI161333852, Length=299, Percent_Identity=28.7625418060201, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI6912466, Length=279, Percent_Identity=30.1075268817204, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI161333854, Length=378, Percent_Identity=25.3968253968254, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI296531375, Length=284, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI289666746, Length=273, Percent_Identity=36.6300366300366, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI284447314, Length=257, Percent_Identity=32.6848249027237, Blast_Score=90, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI25151694, Length=332, Percent_Identity=29.5180722891566, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI25151696, Length=332, Percent_Identity=29.5180722891566, Blast_Score=105, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6322549, Length=352, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17647819, Length=300, Percent_Identity=34, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24662818, Length=262, Percent_Identity=35.4961832061069, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24652783, Length=313, Percent_Identity=31.629392971246, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI161076545, Length=313, Percent_Identity=31.629392971246, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI161076549, Length=313, Percent_Identity=31.629392971246, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI161076547, Length=313, Percent_Identity=31.629392971246, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21357913, Length=231, Percent_Identity=33.7662337662338, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24646754, Length=356, Percent_Identity=26.685393258427, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69655; Mature: 69655

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQ
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQWRKLLGEQKEIVISNFTITHLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSF
HHHHHHCCCCCEEEEECEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
QKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLYSLINANFKFPFEDIPSFIQL
HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKC
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
CNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHH
LTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHL
HHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
NLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD
CCHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLV
CCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH
ALQHLDLSQCPNLTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKC
HHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHCCCCCCCCC
PKLTDAGLAHLAPLVALEHLDLS
CCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIHNPSFNPSNLLVNADTHSYSRSNKHLKFFERINLLCKTIFQGFSSLFFNYLKKDLLQ
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQWRKLLGEQKEIVISNFTITHLESESDVSLSSLSQTSYFAPPSSRLSFQDNTHLNISSF
HHHHHHCCCCCEEEEECEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
QKSLLMEKSPYFKSLWSGSFQETLQDPLALTQKEFTHLLYSLINANFKFPFEDIPSFIQL
HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ADYYQLTEVVKNLEEQLLNGYKSEKFKFFNSNEDSLVELKELLNFAQQYQLDTLKNYLEL
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSSLLNQTSQLTEFEKILNYFSNEVEALNFSENAHLTDAHLLALKTCKNLKVLYLKKC
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
CNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHH
LTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHL
HHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
NLGWCSNLTDAGLAHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD
CCHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
AGLAHLSPLVALQHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLV
CCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH
ALQHLDLSQCPNLTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKC
HHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHHHHHHCCCCCCCCC
PKLTDAGLAHLAPLVALEHLDLS
CCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA