| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447115
Identifier: 46447115
GI number: 46447115
Start: 1757066
End: 1757980
Strand: Direct
Name: 46447115
Synonym: pc1481
Alternate gene names: NA
Gene position: 1757066-1757980 (Clockwise)
Preceding gene: 46447114
Following gene: 46447116
Centisome position: 72.77
GC content: 32.79
Gene sequence:
>915_bases ATGGAAGCTCCGCTTCATTTAAACTTAAATCTTTCGTCCGGTCATTTACCTTCTCAGATAAATACCGTTAAAGAAATAGA TCGTAAAATAGAAAATACTTTGATTAGAGCTTTTAAAAGCCCTACTTTTTATGCCTTTGTTTGTTTGGGAACATTAACGG GACTGTCTCTTTCTACTTTGATTAGAATCACCATCTTATCACCCAAATTACTAAAAACAACTTTATTAGCTTTATCTCTT GCTTTTATTTTTTTACTAAAAAATAACAATCATAAAATTTGGTTTGAGTTTTCTCTTTTATGTATTAGGCTAGAAGCTGC TTTTGTTAAAGTGATGTCTAAACTACTTCCCTTTTCTACGAAAAGAAATTGGTATGATGAAATCCAATTTTCCCACAATT CTACCATGAACCATAAATTACTTTTAGGAGCTATTCCTTTAGCGACGATGTCTCACCATCGAGAACTTCAAAATCTTTTA TCTGACCGTTCATTTTCTGTTTTAAGTATTTTAAAAACATTTGAAAACACTGAAAATGGATGTACAGGATCTCCTGTTTT CCCAACTGACTGGGCTCATTTAAGTATTCCACATAAGCAAATTGAAATCTTTGATTTACATCCCATTCCTATCAATGAAT TAAACGAAGGGGTTAACTTCATTCATGAGCAATTGCAGCAAAGACATGTGTATGTTCATTGCAAAGTTGGTAGAAGCCGT AGTGCGATGATGATTATTGGATATATCATGAAATATTGCCAGCATGAGCTAGCTTTACAAGAAGGCACGAATTTAGTTCA ACAAGCAATCAATTTTGTAAGAAAAAGTCGCCCTCAAATTTACATCAATTCTGTTCAAAAACAAGCTTTAAACAATTATG CTGTTACCCTGATGTCGAATTCTATAACGCTGTAA
Upstream 100 bases:
>100_bases TAATGAATATGATGAATTGTATCAGGAGCAGAGGGTAAGTGATGAAGACTATTATTTTGAAAATGAAGAAGATTTAACAG AAAAATAAGAGGAAACTAAG
Downstream 100 bases:
>100_bases TTGAAATTTAATAGAAAAGCCACTAGGAATAAAAAACCCGTTTGTTTTACAAAGAATTTTTATTACTTATCTTACCTACG AAAGGGTAGATGGAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MEAPLHLNLNLSSGHLPSQINTVKEIDRKIENTLIRAFKSPTFYAFVCLGTLTGLSLSTLIRITILSPKLLKTTLLALSL AFIFLLKNNNHKIWFEFSLLCIRLEAAFVKVMSKLLPFSTKRNWYDEIQFSHNSTMNHKLLLGAIPLATMSHHRELQNLL SDRSFSVLSILKTFENTENGCTGSPVFPTDWAHLSIPHKQIEIFDLHPIPINELNEGVNFIHEQLQQRHVYVHCKVGRSR SAMMIIGYIMKYCQHELALQEGTNLVQQAINFVRKSRPQIYINSVQKQALNNYAVTLMSNSITL
Sequences:
>Translated_304_residues MEAPLHLNLNLSSGHLPSQINTVKEIDRKIENTLIRAFKSPTFYAFVCLGTLTGLSLSTLIRITILSPKLLKTTLLALSL AFIFLLKNNNHKIWFEFSLLCIRLEAAFVKVMSKLLPFSTKRNWYDEIQFSHNSTMNHKLLLGAIPLATMSHHRELQNLL SDRSFSVLSILKTFENTENGCTGSPVFPTDWAHLSIPHKQIEIFDLHPIPINELNEGVNFIHEQLQQRHVYVHCKVGRSR SAMMIIGYIMKYCQHELALQEGTNLVQQAINFVRKSRPQIYINSVQKQALNNYAVTLMSNSITL >Mature_304_residues MEAPLHLNLNLSSGHLPSQINTVKEIDRKIENTLIRAFKSPTFYAFVCLGTLTGLSLSTLIRITILSPKLLKTTLLALSL AFIFLLKNNNHKIWFEFSLLCIRLEAAFVKVMSKLLPFSTKRNWYDEIQFSHNSTMNHKLLLGAIPLATMSHHRELQNLL SDRSFSVLSILKTFENTENGCTGSPVFPTDWAHLSIPHKQIEIFDLHPIPINELNEGVNFIHEQLQQRHVYVHCKVGRSR SAMMIIGYIMKYCQHELALQEGTNLVQQAINFVRKSRPQIYINSVQKQALNNYAVTLMSNSITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34725; Mature: 34725
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAPLHLNLNLSSGHLPSQINTVKEIDRKIENTLIRAFKSPTFYAFVCLGTLTGLSLSTL CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH IRITILSPKLLKTTLLALSLAFIFLLKNNNHKIWFEFSLLCIRLEAAFVKVMSKLLPFST HHHEECCHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC KRNWYDEIQFSHNSTMNHKLLLGAIPLATMSHHRELQNLLSDRSFSVLSILKTFENTENG CCCHHHHHEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC CTGSPVFPTDWAHLSIPHKQIEIFDLHPIPINELNEGVNFIHEQLQQRHVYVHCKVGRSR CCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCC SAMMIIGYIMKYCQHELALQEGTNLVQQAINFVRKSRPQIYINSVQKQALNNYAVTLMSN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEECC SITL CCCC >Mature Secondary Structure MEAPLHLNLNLSSGHLPSQINTVKEIDRKIENTLIRAFKSPTFYAFVCLGTLTGLSLSTL CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH IRITILSPKLLKTTLLALSLAFIFLLKNNNHKIWFEFSLLCIRLEAAFVKVMSKLLPFST HHHEECCHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC KRNWYDEIQFSHNSTMNHKLLLGAIPLATMSHHRELQNLLSDRSFSVLSILKTFENTENG CCCHHHHHEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC CTGSPVFPTDWAHLSIPHKQIEIFDLHPIPINELNEGVNFIHEQLQQRHVYVHCKVGRSR CCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCC SAMMIIGYIMKYCQHELALQEGTNLVQQAINFVRKSRPQIYINSVQKQALNNYAVTLMSN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEECC SITL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA