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The map label for this gene is tnpA [H]

Identifier: 46447104

GI number: 46447104

Start: 1745807

End: 1746337

Strand: Direct

Name: tnpA [H]

Synonym: pc1470

Alternate gene names: 46447104

Gene position: 1745807-1746337 (Clockwise)

Preceding gene: 46447103

Following gene: 46447105

Centisome position: 72.31

GC content: 38.23

Gene sequence:

>531_bases
GTGCCTATTGCGGGCGCAAGCGATCTTTATCGGATGCTGATATTCTCTCATTACGACAACGCATTCAAAATGGTGAAAAG
AAATCAAAAGTTGCCAGAGAATTTGGCATTAGCCGTGAAACCCTTTATCAATATCTTCGTTCGGTATAAATATGTCTCGA
CGCACAATCCTATCCTACCCTTCCATACAAAGGTTATAAACATTGAAGTTCGTGATGCAACCTATGTACTTGGCGGTCTG
CTATATCACGAATCTGATATAAGAATTGAGGAACCCTACACAGATACATCCGGTTTTATAGACCATATTTTTGCGCTTAT
GCATCTTCTTGGATTTCGCTTCGCGCCTCGCATTCGTGATTTAGCGAATAAACAATTATTTGTCACAAGTAGTAAAAAGG
AATATCCCTCAATTAATACCTTGATTGATGATGTGATCAATGTAAAGCACATCCGATCTTATTGGGATGAAATTCTATGT
TTGGCTGCTTTTATTAAACAAGGAACGGTTAGCTTCTTTAATATTGCGTAA

Upstream 100 bases:

>100_bases
GCCATCCTTATGCTGTCAGTCATGGGAGCGTTTGCCGAGTTTGAACGTTCTTTAATTCGTGAGCGTCAACGCGAGGGGAT
TGCTCTAGCCAAGCAGCGTG

Downstream 100 bases:

>100_bases
GCTTGGAAGTTATCCACGTCAGAATGGGTTAGCCTTGGCATTGATAGAACTTGGGTGGATCGAACGCACTTTCTGGTTAC
AGAATGTTGAATTGCGCCGT

Product: transposase, partial length

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPIAGASDLYRMLIFSHYDNAFKMVKRNQKLPENLALAVKPFINIFVRYKYVSTHNPILPFHTKVINIEVRDATYVLGGL
LYHESDIRIEEPYTDTSGFIDHIFALMHLLGFRFAPRIRDLANKQLFVTSSKKEYPSINTLIDDVINVKHIRSYWDEILC
LAAFIKQGTVSFFNIA

Sequences:

>Translated_176_residues
MPIAGASDLYRMLIFSHYDNAFKMVKRNQKLPENLALAVKPFINIFVRYKYVSTHNPILPFHTKVINIEVRDATYVLGGL
LYHESDIRIEEPYTDTSGFIDHIFALMHLLGFRFAPRIRDLANKQLFVTSSKKEYPSINTLIDDVINVKHIRSYWDEILC
LAAFIKQGTVSFFNIA
>Mature_175_residues
PIAGASDLYRMLIFSHYDNAFKMVKRNQKLPENLALAVKPFINIFVRYKYVSTHNPILPFHTKVINIEVRDATYVLGGLL
YHESDIRIEEPYTDTSGFIDHIFALMHLLGFRFAPRIRDLANKQLFVTSSKKEYPSINTLIDDVINVKHIRSYWDEILCL
AAFIKQGTVSFFNIA

Specific function: Required for transposition of transposon Tn501 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 20386; Mature: 20255

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAGASDLYRMLIFSHYDNAFKMVKRNQKLPENLALAVKPFINIFVRYKYVSTHNPILP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCC
FHTKVINIEVRDATYVLGGLLYHESDIRIEEPYTDTSGFIDHIFALMHLLGFRFAPRIRD
CEEEEEEEEECCHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LANKQLFVTSSKKEYPSINTLIDDVINVKHIRSYWDEILCLAAFIKQGTVSFFNIA
HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
PIAGASDLYRMLIFSHYDNAFKMVKRNQKLPENLALAVKPFINIFVRYKYVSTHNPILP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCC
FHTKVINIEVRDATYVLGGLLYHESDIRIEEPYTDTSGFIDHIFALMHLLGFRFAPRIRD
CEEEEEEEEECCHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LANKQLFVTSSKKEYPSINTLIDDVINVKHIRSYWDEILCLAAFIKQGTVSFFNIA
HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2994007; 6312271 [H]