Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46447102

Identifier: 46447102

GI number: 46447102

Start: 1744634

End: 1745023

Strand: Direct

Name: 46447102

Synonym: pc1468

Alternate gene names: NA

Gene position: 1744634-1745023 (Clockwise)

Preceding gene: 46447098

Following gene: 46447103

Centisome position: 72.26

GC content: 38.21

Gene sequence:

>390_bases
ATGGATGTAACTGAACTCTATTGTACAATTGATGATTTTTGGAAATCTTTTAAGCAAGAAGGGAAAAAACACCTTACAGA
ATCTGGAAAGCACAAATCGCTTTCGCTTCTCTTTGGACTTGATCAATCTGCTTATCAATATCAATTTTCTTGCCAGTGTA
CTGTTCTACCCCATGCTTTAGGTCGCAACATGTACCCAATGATTTTGTTTGTCTCACCCTTGTCTATGCACTTCTTGATC
TTCCCAAAAACTTTCTCTACCTTAATGCAAAAGTTAATTGCGTTTAGATCAAAATTAACACCAGCCATAAGAGCAGGAGG
GGTTAGTGTTGCAGTCGTGAAAGCAATTGTTGTAAGACATGCAACCATAGCGTTGTTGAAACGAGACTGA

Upstream 100 bases:

>100_bases
TAGGCTTAAACAAGCTGTATAAAATTTGAATGACAAAAGACCTCAACATGATTTAAAAGCACTGTTTACCACAACCATAT
TTAATCATGAGAGGTCAAAA

Downstream 100 bases:

>100_bases
AGTATATTAACCATAACGTCCTTTGTTTTGTTTTTTTTTTGTGTATTCAATTTTATGGTAATCAAGCTCATTAAAGATTG
TTTTCCATGCAAGGAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDVTELYCTIDDFWKSFKQEGKKHLTESGKHKSLSLLFGLDQSAYQYQFSCQCTVLPHALGRNMYPMILFVSPLSMHFLI
FPKTFSTLMQKLIAFRSKLTPAIRAGGVSVAVVKAIVVRHATIALLKRD

Sequences:

>Translated_129_residues
MDVTELYCTIDDFWKSFKQEGKKHLTESGKHKSLSLLFGLDQSAYQYQFSCQCTVLPHALGRNMYPMILFVSPLSMHFLI
FPKTFSTLMQKLIAFRSKLTPAIRAGGVSVAVVKAIVVRHATIALLKRD
>Mature_129_residues
MDVTELYCTIDDFWKSFKQEGKKHLTESGKHKSLSLLFGLDQSAYQYQFSCQCTVLPHALGRNMYPMILFVSPLSMHFLI
FPKTFSTLMQKLIAFRSKLTPAIRAGGVSVAVVKAIVVRHATIALLKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14598; Mature: 14598

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTELYCTIDDFWKSFKQEGKKHLTESGKHKSLSLLFGLDQSAYQYQFSCQCTVLPHAL
CCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHEEEEEEEEEECCHHH
GRNMYPMILFVSPLSMHFLIFPKTFSTLMQKLIAFRSKLTPAIRAGGVSVAVVKAIVVRH
CCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
ATIALLKRD
HHHEEEECC
>Mature Secondary Structure
MDVTELYCTIDDFWKSFKQEGKKHLTESGKHKSLSLLFGLDQSAYQYQFSCQCTVLPHAL
CCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHEEEEEEEEEECCHHH
GRNMYPMILFVSPLSMHFLIFPKTFSTLMQKLIAFRSKLTPAIRAGGVSVAVVKAIVVRH
CCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
ATIALLKRD
HHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA